Strain Fitness in Marinobacter adhaerens HP15 around HP15_1955

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,074,426	+		HP15_1954	0.67	-0.3
2,074,452	-		HP15_1954	0.68	-0.4
2,074,557	+		HP15_1954	0.71	+0.1
2,074,562	+		HP15_1954	0.72	+1.2
2,074,577	-		HP15_1954	0.72	-0.3
2,074,588	+		HP15_1954	0.73	-0.4
2,074,691	+		HP15_1954	0.76	-0.1
2,074,708	+		HP15_1954	0.77	-1.0
2,074,729	+		HP15_1954	0.78	-3.0
2,074,806	+		HP15_1954	0.80	+1.8
2,074,861	+		HP15_1954	0.82	+1.0
2,075,003	-		HP15_1954	0.88	-0.1
2,075,190	+				-0.1
2,075,250	-				+0.6
2,075,304	+				-0.8
2,075,377	+				+2.4
2,075,538	+		HP15_1955	0.35	-0.6
2,075,587	+		HP15_1955	0.47	-0.7
2,075,617	-		HP15_1955	0.54	-0.6
2,075,656	-		HP15_1955	0.64	-0.6
2,075,696	-		HP15_1955	0.73	-0.4
2,075,905	+				+1.0
2,075,913	-				-0.3
2,075,970	+				+1.2
2,075,970	+				+1.9
2,075,977	-				-0.6
2,075,988	+				-0.4
2,076,035	-		HP15_1956	0.12	-1.1
2,076,035	-		HP15_1956	0.12	+0.5
2,076,035	-		HP15_1956	0.12	+0.2
2,076,035	-		HP15_1956	0.12	-1.6
2,076,035	-		HP15_1956	0.12	+0.5
2,076,067	+		HP15_1956	0.19	-0.2
2,076,075	-		HP15_1956	0.20	+1.5
2,076,108	+		HP15_1956	0.27	+1.5
2,076,116	-		HP15_1956	0.28	+1.4
2,076,318	+		HP15_1956	0.68	-0.2
2,076,380	-		HP15_1956	0.80	-0.6
2,076,570	-				+1.0
2,076,576	+		HP15_1957	0.10	-1.0
2,076,576	+		HP15_1957	0.10	-0.4
2,076,576	+		HP15_1957	0.10	+0.9
2,076,576	+		HP15_1957	0.10	-0.0
2,076,683	-		HP15_1957	0.21	+0.8
2,076,693	-		HP15_1957	0.22	-0.3
2,076,697	+		HP15_1957	0.23	-1.5
2,076,702	+		HP15_1957	0.23	-0.1
2,076,731	+		HP15_1957	0.26	-0.6
2,076,739	-		HP15_1957	0.27	-3.5
2,076,744	-		HP15_1957	0.28	+1.0
2,076,744	-		HP15_1957	0.28	-0.9
2,076,773	-		HP15_1957	0.31	-0.9