Strain Fitness in Marinobacter adhaerens HP15 around HP15_1899

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,007,976	-				+1.2
2,007,988	+				-0.2
2,008,118	-		HP15_1898	0.13	+1.7
2,008,148	-		HP15_1898	0.17	+0.2
2,008,353	+		HP15_1898	0.39	-0.1
2,008,508	+		HP15_1898	0.56	-2.5
2,008,546	+		HP15_1898	0.61	+1.1
2,008,546	-		HP15_1898	0.61	-0.1
2,008,624	-		HP15_1898	0.69	-0.3
2,008,651	+		HP15_1898	0.72	-0.3
2,008,651	+		HP15_1898	0.72	+0.3
2,008,748	-		HP15_1898	0.83	-0.8
2,008,753	+		HP15_1898	0.84	-0.9
2,008,781	-		HP15_1898	0.87	-1.1
2,008,859	-				-0.3
2,008,936	+				-0.3
2,008,985	-				-0.2
2,009,053	+		HP15_1899	0.13	+2.2
2,009,100	-		HP15_1899	0.18	-0.6
2,009,100	-		HP15_1899	0.18	-1.3
2,009,137	+		HP15_1899	0.21	+0.9
2,009,306	-		HP15_1899	0.38	-0.0
2,009,321	+		HP15_1899	0.39	+1.0
2,009,340	+		HP15_1899	0.41	-0.7
2,009,340	+		HP15_1899	0.41	+1.2
2,009,452	-		HP15_1899	0.52	+2.2
2,009,463	-		HP15_1899	0.53	+1.7
2,009,477	+		HP15_1899	0.54	+1.7
2,009,478	+		HP15_1899	0.55	-1.0
2,009,604	-		HP15_1899	0.67	+0.5
2,009,692	+		HP15_1899	0.75	-0.2
2,009,722	-		HP15_1899	0.78	-0.3
2,009,722	-		HP15_1899	0.78	+1.6
2,009,722	-		HP15_1899	0.78	-0.5
2,009,783	+		HP15_1899	0.84	+0.1
2,009,801	+		HP15_1899	0.86	-0.4
2,009,801	-		HP15_1899	0.86	-0.4
2,009,801	-		HP15_1899	0.86	-0.6
2,009,819	-		HP15_1899	0.88	+1.5
2,010,302	-		HP15_1900	0.66	+1.6
2,010,395	-		HP15_1900	0.84	+1.8
2,010,548	+				+1.3
2,010,601	+				+0.4
2,010,616	+				-1.0
2,010,624	-				-0.7
2,010,668	-		HP15_1901	0.12	+1.1
2,010,701	+		HP15_1901	0.15	+1.8
2,010,757	+		HP15_1901	0.19	-0.5
2,010,907	-		HP15_1901	0.31	+1.9