Strain Fitness in Marinobacter adhaerens HP15 around HP15_492

Experiment: monoculture; Experiment C, time point 4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_489 and HP15_491 are separated by 77 nucleotidesHP15_491 and HP15_492 overlap by 4 nucleotidesHP15_492 and HP15_493 are separated by 64 nucleotides HP15_489: HP15_489 - glycine hydroxymethyltransferase, at 505,253 to 506,506 _489 HP15_491: HP15_491 - transcriptional repressor NrdR, at 506,584 to 507,102 _491 HP15_492: HP15_492 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase, at 507,099 to 508,214 _492 HP15_493: HP15_493 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein, at 508,279 to 509,394 _493 Position (kb) 507 508 509Strain fitness (log2 ratio) -1 0 1at 506.916 kb on + strand, within HP15_491

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment C, time point 4
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506,916 + HP15_491 0.64 -1.7

Or see this region's nucleotide sequence