Strain Fitness in Marinobacter adhaerens HP15 around HP15_4101

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
4,335,100	-		HP15_4100	0.46	+0.1
4,335,123	-		HP15_4100	0.47	-0.4
4,335,244	+		HP15_4100	0.54	+1.8
4,335,343	+		HP15_4100	0.59	-0.4
4,335,351	-		HP15_4100	0.59	+0.6
4,335,351	-		HP15_4100	0.59	+0.4
4,335,404	-		HP15_4100	0.62	-0.1
4,335,421	-		HP15_4100	0.63	-0.1
4,335,452	-		HP15_4100	0.65	+0.2
4,335,480	-		HP15_4100	0.67	+0.3
4,335,494	-		HP15_4100	0.67	+0.1
4,335,687	-		HP15_4100	0.78	+0.8
4,335,687	-		HP15_4100	0.78	+0.7
4,335,738	+		HP15_4100	0.81	+1.3
4,335,810	-		HP15_4100	0.85	-0.7
4,335,834	-		HP15_4100	0.86	-0.7
4,335,839	+		HP15_4100	0.86	+0.5
4,335,922	-				-0.7
4,335,983	+				-0.3
4,336,013	-				+0.1
4,336,159	-		HP15_4101	0.20	-0.9
4,336,159	-		HP15_4101	0.20	-0.3
4,336,159	-		HP15_4101	0.20	-1.3
4,336,159	-		HP15_4101	0.20	+0.7
4,336,159	-		HP15_4101	0.20	-0.2
4,336,159	-		HP15_4101	0.20	-0.2
4,336,311	-		HP15_4101	0.67	-0.7
4,336,361	+		HP15_4101	0.83	-0.9
4,336,445	-				-0.5
4,336,494	+				-2.1
4,336,523	+				-0.2
4,336,523	+				-0.1
4,336,531	-				-0.8
4,336,619	+		HP15_4102	0.11	-0.9
4,336,655	-		HP15_4102	0.15	-0.3
4,336,675	-		HP15_4102	0.17	+0.1
4,336,781	-		HP15_4102	0.27	+0.4
4,336,870	-		HP15_4102	0.36	+0.1
4,336,886	+		HP15_4102	0.38	+2.1
4,337,023	-		HP15_4102	0.52	-1.3
4,337,055	-		HP15_4102	0.55	-0.4
4,337,071	-		HP15_4102	0.57	+0.1
4,337,110	-		HP15_4102	0.61	-1.1
4,337,113	+		HP15_4102	0.61	-4.1
4,337,138	+		HP15_4102	0.64	-0.3
4,337,222	-		HP15_4102	0.72	+0.4
4,337,310	-		HP15_4102	0.81	+0.8
4,337,315	-		HP15_4102	0.81	-0.3
4,337,315	-		HP15_4102	0.81	+0.3
4,337,391	+		HP15_4102	0.89	+0.5
4,337,406	-				+0.3