Strain Fitness in Marinobacter adhaerens HP15 around HP15_4053

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
4,286,826	-				-0.3
4,286,991	+		HP15_4052	0.23	+0.3
4,287,019	+		HP15_4052	0.25	-0.2
4,287,037	-		HP15_4052	0.27	-0.4
4,287,044	+		HP15_4052	0.28	+0.7
4,287,224	-		HP15_4052	0.47	+0.7
4,287,247	+		HP15_4052	0.49	-0.9
4,287,264	+		HP15_4052	0.51	+0.3
4,287,474	+		HP15_4052	0.73	-0.0
4,287,497	+		HP15_4052	0.76	+2.1
4,287,503	+				-1.1
4,287,521	+		HP15_4052	0.78	+1.4
4,287,539	+		HP15_4052	0.80	-0.7
4,287,547	+		HP15_4052	0.81	+0.4
4,287,583	-		HP15_4052	0.85	+0.1
4,287,616	-		HP15_4052	0.88	+0.1
4,287,651	-				+0.3
4,287,818	+				+0.2
4,287,826	-				-1.0
4,287,826	-				-0.3
4,287,826	-				+0.1
4,287,833	-				-0.3
4,287,862	+				-0.5
4,287,870	+				-0.2
4,287,875	+				+0.0
4,287,897	-				+0.0
4,287,906	-				-0.5
4,287,953	-		HP15_4053	0.11	-0.3
4,288,015	-		HP15_4053	0.16	+0.6
4,288,044	-		HP15_4053	0.18	-0.2
4,288,047	-		HP15_4053	0.18	+0.7
4,288,047	-		HP15_4053	0.18	+0.3
4,288,061	+		HP15_4053	0.19	-0.1
4,288,088	+		HP15_4053	0.21	+0.1
4,288,129	-		HP15_4053	0.24	+0.4
4,288,151	-		HP15_4053	0.26	+0.4
4,288,363	+		HP15_4053	0.42	-0.9
4,288,371	+		HP15_4053	0.42	+1.5
4,288,441	-		HP15_4053	0.48	-1.2
4,288,481	+		HP15_4053	0.51	-2.2
4,288,491	+		HP15_4053	0.51	-0.3
4,288,498	-		HP15_4053	0.52	-1.2
4,288,500	+		HP15_4053	0.52	-0.8
4,288,525	+		HP15_4053	0.54	-0.2
4,288,537	+		HP15_4053	0.55	-0.0
4,288,577	-		HP15_4053	0.58	-1.9
4,288,579	+		HP15_4053	0.58	-0.1
4,288,591	+		HP15_4053	0.59	+0.8
4,288,599	-		HP15_4053	0.59	-0.4
4,288,663	+		HP15_4053	0.64	-1.9
4,288,704	+		HP15_4053	0.67	+0.3
4,288,704	+		HP15_4053	0.67	+0.7
4,288,704	+		HP15_4053	0.67	+0.6
4,288,706	-		HP15_4053	0.67	-0.4
4,288,712	-		HP15_4053	0.68	-0.3
4,288,712	-		HP15_4053	0.68	-0.9
4,288,712	-		HP15_4053	0.68	+0.6
4,288,718	-		HP15_4053	0.68	+0.1
4,288,780	-		HP15_4053	0.73	-0.6
4,288,830	+		HP15_4053	0.77	-0.6
4,288,856	+		HP15_4053	0.79	-2.5
4,288,896	-		HP15_4053	0.82	-0.6
4,288,970	+		HP15_4053	0.87	-0.5
4,288,978	-		HP15_4053	0.88	-0.3
4,289,046	+				+0.6
4,289,056	-				-1.1
4,289,091	+				-0.8
4,289,138	+				+0.4
4,289,282	+				-0.1
4,289,287	+				-0.1
4,289,295	-				+0.1
4,289,295	-				-0.4
4,289,363	-				-0.1
4,289,499	+		HP15_4054	0.28	+0.4
4,289,529	-		HP15_4054	0.33	-0.3
4,289,578	+		HP15_4054	0.40	+0.5
4,289,671	-		HP15_4054	0.54	-0.6
4,289,707	-		HP15_4054	0.59	-0.2
4,289,732	+		HP15_4054	0.63	+0.1
4,289,742	+		HP15_4054	0.64	+0.5
4,289,750	-		HP15_4054	0.65	+0.4
4,289,780	+		HP15_4054	0.70	+0.9
4,289,788	-		HP15_4054	0.71	-1.6
4,289,831	-		HP15_4054	0.77	+0.5
4,289,968	+				-0.4
4,289,968	+				-0.1
4,289,968	+				+0.2
4,290,017	+				-0.5
4,290,052	+				-0.1