Strain Fitness in Marinobacter adhaerens HP15 around HP15_3013
Experiment: monoculture; Experiment C, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 4 |
---|---|---|---|---|---|
remove | |||||
3,156,504 | - | -1.1 | |||
3,157,365 | - | HP15_3013 | 0.23 | -1.6 | |
3,157,376 | - | HP15_3013 | 0.26 | -1.8 | |
3,157,445 | + | HP15_3013 | 0.40 | -1.6 | |
3,157,521 | - | HP15_3013 | 0.57 | -0.7 | |
3,157,690 | + | -1.2 | |||
3,157,722 | - | -0.7 | |||
3,157,745 | - | -0.7 | |||
3,157,834 | + | +0.1 | |||
3,157,842 | - | +0.1 | |||
3,157,850 | + | +1.0 | |||
3,157,952 | - | -0.3 | |||
3,158,046 | + | -0.5 | |||
3,158,097 | + | +0.8 | |||
3,158,111 | - | +0.5 | |||
3,158,167 | + | HP15_3014 | 0.12 | +0.9 | |
3,158,205 | + | HP15_3014 | 0.13 | -0.1 | |
3,158,221 | - | HP15_3014 | 0.14 | -0.4 | |
3,158,428 | - | HP15_3014 | 0.24 | +0.1 |
Or see this region's nucleotide sequence