Strain Fitness in Marinobacter adhaerens HP15 around HP15_1687

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
1,771,106	-		HP15_1685	0.52	-0.7
1,771,118	-		HP15_1685	0.54	-0.9
1,771,123	-		HP15_1685	0.55	+0.9
1,771,128	+		HP15_1685	0.56	-0.9
1,771,128	-		HP15_1685	0.56	-0.4
1,771,136	-		HP15_1685	0.57	-0.7
1,771,136	-		HP15_1685	0.57	-0.4
1,771,158	+		HP15_1685	0.61	-1.8
1,771,166	-		HP15_1685	0.62	+0.5
1,771,282	+		HP15_1685	0.82	+0.2
1,771,308	+		HP15_1685	0.86	-1.3
1,771,529	-				+0.2
1,771,565	+		HP15_1686	0.15	+0.1
1,771,565	+		HP15_1686	0.15	-0.2
1,771,573	-		HP15_1686	0.17	+0.1
1,771,616	+		HP15_1686	0.29	-0.6
1,771,852	-				+0.7
1,771,852	-				+0.4
1,771,852	-				-0.3
1,771,889	-				-0.4
1,771,891	+				-0.6
1,771,927	+				+0.3
1,771,941	+				+0.6
1,772,045	+				-1.2
1,772,079	-				-1.0
1,772,148	-		HP15_1687	0.11	+0.1
1,772,191	+		HP15_1687	0.14	-0.0
1,772,239	-		HP15_1687	0.17	-1.6
1,772,466	+		HP15_1687	0.33	-0.4
1,772,547	+		HP15_1687	0.38	-0.0
1,772,594	-		HP15_1687	0.42	+0.5
1,772,745	-		HP15_1687	0.52	+1.3
1,772,883	-		HP15_1687	0.62	-0.9
1,772,976	+		HP15_1687	0.68	+2.8
1,773,060	-		HP15_1687	0.74	-0.5
1,773,071	+		HP15_1687	0.75	-1.0
1,773,079	-		HP15_1687	0.75	+0.3
1,773,084	-		HP15_1687	0.76	-1.2
1,773,214	+		HP15_1687	0.85	-1.2
1,773,236	+		HP15_1687	0.86	-0.2
1,773,244	-		HP15_1687	0.87	-0.9
1,773,284	-		HP15_1687	0.89	-0.2
1,773,417	-				-0.1
1,773,719	+		HP15_1688	0.13	+0.7
1,773,791	+		HP15_1688	0.18	-0.3
1,773,794	-		HP15_1688	0.19	+1.1
1,773,799	-		HP15_1688	0.19	+0.3
1,773,860	+		HP15_1688	0.23	-0.3
1,774,141	+		HP15_1688	0.44	+0.3
1,774,149	-		HP15_1688	0.44	+0.1
1,774,156	+		HP15_1688	0.45	+1.1
1,774,156	+		HP15_1688	0.45	+1.3
1,774,221	+		HP15_1688	0.49	-0.7
1,774,221	+		HP15_1688	0.49	-0.2
1,774,266	+		HP15_1688	0.53	-0.1
1,774,274	-		HP15_1688	0.53	+0.5
1,774,281	+		HP15_1688	0.54	+0.4
1,774,336	-		HP15_1688	0.58	+0.2
1,774,340	+		HP15_1688	0.58	+0.1