Strain Fitness in Marinobacter adhaerens HP15 around HP15_1534
Experiment: monoculture; Experiment C, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 4 |
---|---|---|---|---|---|
remove | |||||
1,617,258 | + | HP15_1533 | 0.79 | -0.7 | |
1,617,408 | + | HP15_1533 | 0.83 | -1.1 | |
1,617,465 | + | HP15_1533 | 0.85 | -0.1 | |
1,617,540 | + | HP15_1533 | 0.87 | -0.8 | |
1,617,548 | - | HP15_1533 | 0.87 | -0.7 | |
1,617,604 | - | HP15_1533 | 0.89 | -0.1 | |
1,617,674 | - | +0.3 | |||
1,617,797 | - | -0.9 | |||
1,617,978 | + | +1.1 | |||
1,617,987 | - | -1.1 | |||
1,618,839 | + | HP15_1534 | 0.72 | +0.2 | |
1,618,893 | + | HP15_1534 | 0.78 | +1.2 | |
1,619,018 | + | HP15_1534 | 0.90 | +0.2 |
Or see this region's nucleotide sequence