Strain Fitness in Marinobacter adhaerens HP15 around HP15_1295
Experiment: monoculture; Experiment C, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 4 |
---|---|---|---|---|---|
remove | |||||
1,354,886 | + | HP15_1293 | 0.89 | -0.0 | |
1,354,941 | - | -0.9 | |||
1,354,946 | - | -0.2 | |||
1,354,946 | - | +0.8 | |||
1,354,967 | - | -0.7 | |||
1,355,062 | - | -0.4 | |||
1,355,062 | - | -0.5 | |||
1,355,094 | - | +0.3 | |||
1,355,115 | - | -1.8 | |||
1,356,161 | + | HP15_1295 | 0.52 | +0.7 | |
1,356,180 | + | HP15_1295 | 0.55 | -1.9 | |
1,356,188 | - | HP15_1295 | 0.56 | -0.3 | |
1,356,427 | + | +0.6 | |||
1,356,460 | - | +0.7 | |||
1,356,490 | - | +0.2 | |||
1,356,496 | + | +0.3 | |||
1,356,501 | + | +0.7 | |||
1,356,602 | - | +0.1 | |||
1,356,664 | + | HP15_1296 | 0.11 | +0.9 | |
1,356,973 | + | HP15_1296 | 0.35 | +0.1 | |
1,356,978 | + | HP15_1296 | 0.35 | -0.3 | |
1,356,981 | - | HP15_1296 | 0.36 | +0.5 | |
1,356,986 | - | HP15_1296 | 0.36 | +0.4 |
Or see this region's nucleotide sequence