Strain Fitness in Marinobacter adhaerens HP15 around HP15_4091

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
4,322,568	+		HP15_4089	0.79	-1.1
4,322,568	+		HP15_4089	0.79	-0.0
4,322,618	-		HP15_4089	0.82	-1.1
4,322,781	-				-0.8
4,322,841	+				+0.6
4,322,851	+				+0.0
4,322,859	-				-0.7
4,322,863	+				-0.6
4,322,955	+		HP15_4090	0.13	-0.9
4,322,963	-		HP15_4090	0.14	-0.9
4,323,034	-		HP15_4090	0.25	-1.2
4,323,103	+		HP15_4090	0.35	-0.5
4,323,155	-		HP15_4090	0.43	-0.0
4,323,225	+		HP15_4090	0.53	-2.0
4,323,233	+		HP15_4090	0.54	-3.3
4,323,233	-		HP15_4090	0.54	+0.2
4,323,233	-		HP15_4090	0.54	-1.5
4,323,233	-		HP15_4090	0.54	-1.6
4,323,313	-		HP15_4090	0.66	-1.2
4,323,344	+		HP15_4090	0.71	-0.8
4,323,352	-		HP15_4090	0.72	-0.4
4,323,362	-		HP15_4090	0.73	-0.4
4,323,362	-		HP15_4090	0.73	-0.8
4,323,400	+		HP15_4090	0.79	+0.1
4,323,431	-		HP15_4090	0.84	-1.3
4,323,451	-		HP15_4090	0.87	-0.8
4,323,485	-				-0.4
4,323,491	-				-1.5
4,323,533	+				+0.4
4,323,616	+				+0.2
4,323,655	+				-0.1
4,323,693	-				+0.1
4,323,754	+				+0.1
4,323,900	+		HP15_4091	0.13	+0.6
4,323,971	-		HP15_4091	0.15	+1.0
4,323,999	+		HP15_4091	0.16	+1.2
4,323,999	+		HP15_4091	0.16	-0.1
4,323,999	+		HP15_4091	0.16	-0.2
4,324,007	-		HP15_4091	0.17	+0.1
4,324,007	-		HP15_4091	0.17	-0.7
4,324,012	+		HP15_4091	0.17	-1.1
4,324,017	-		HP15_4091	0.17	-0.5
4,324,020	-		HP15_4091	0.17	-0.4
4,324,056	+		HP15_4091	0.18	-0.2
4,324,056	+		HP15_4091	0.18	-1.4
4,324,056	+		HP15_4091	0.18	-0.2
4,324,210	+		HP15_4091	0.24	+0.1
4,324,217	-		HP15_4091	0.24	-0.5
4,324,332	+		HP15_4091	0.28	+0.6
4,324,463	+		HP15_4091	0.33	-0.9
4,324,520	+		HP15_4091	0.35	+0.5
4,324,551	-		HP15_4091	0.36	+0.4
4,324,617	+		HP15_4091	0.38	+0.2
4,324,625	-		HP15_4091	0.39	-0.2
4,324,647	-		HP15_4091	0.39	+1.2
4,324,649	+		HP15_4091	0.39	+2.1
4,324,649	+		HP15_4091	0.39	-0.3
4,324,649	+		HP15_4091	0.39	-1.0
4,324,657	-		HP15_4091	0.40	-0.1
4,324,657	-		HP15_4091	0.40	+0.3
4,324,657	-		HP15_4091	0.40	-0.3
4,324,666	+		HP15_4091	0.40	-0.5
4,324,703	+		HP15_4091	0.41	+0.3
4,324,793	+		HP15_4091	0.45	+0.3
4,324,854	+		HP15_4091	0.47	+1.5
4,324,909	+		HP15_4091	0.49	-0.3
4,325,011	+		HP15_4091	0.52	-0.2
4,325,134	-		HP15_4091	0.57	-0.2
4,325,222	-		HP15_4091	0.60	+0.2
4,325,342	+		HP15_4091	0.64	+0.8
4,325,392	+		HP15_4091	0.66	-2.1
4,325,400	-		HP15_4091	0.66	+0.6
4,325,414	-		HP15_4091	0.67	-0.9
4,325,435	+		HP15_4091	0.67	+0.7
4,325,469	+		HP15_4091	0.69	-0.2
4,325,509	-		HP15_4091	0.70	+0.2
4,325,514	+		HP15_4091	0.70	-0.0
4,325,525	+		HP15_4091	0.71	-0.5
4,325,585	+		HP15_4091	0.73	+0.6
4,325,593	-		HP15_4091	0.73	-0.5
4,325,701	-		HP15_4091	0.77	-0.5
4,325,775	+		HP15_4091	0.79	-0.4
4,325,783	-		HP15_4091	0.80	+1.5
4,325,783	-		HP15_4091	0.80	+0.8
4,325,783	-		HP15_4091	0.80	+0.1
4,325,783	-		HP15_4091	0.80	+0.6
4,325,895	-		HP15_4091	0.84	+0.1
4,325,925	+		HP15_4091	0.85	-1.2
4,325,966	+		HP15_4091	0.86	-0.7
4,325,974	-		HP15_4091	0.87	+0.9
4,326,014	-		HP15_4091	0.88	-0.0
4,326,019	+		HP15_4091	0.88	-0.4
4,326,068	-		HP15_4091	0.90	-1.0
4,326,115	-				-0.8
4,326,126	-				+0.2
4,326,128	+				-0.2
4,326,240	+				-0.1
4,326,435	-		HP15_4092	0.11	+0.1
4,326,437	+		HP15_4092	0.11	+2.3
4,326,445	-		HP15_4092	0.12	-0.1
4,326,445	-		HP15_4092	0.12	+1.1
4,326,455	-		HP15_4092	0.13	-0.3
4,326,481	-		HP15_4092	0.17	-0.1
4,326,580	+		HP15_4092	0.30	+0.2
4,326,602	-		HP15_4092	0.33	-0.6
4,326,607	-		HP15_4092	0.34	+0.9
4,326,614	+		HP15_4092	0.35	-0.1
4,326,676	+		HP15_4092	0.43	+0.1
4,326,684	-		HP15_4092	0.44	-0.0
4,326,697	+		HP15_4092	0.46	-0.5
4,326,702	+		HP15_4092	0.47	+0.1
4,326,763	-		HP15_4092	0.55	+0.5
4,326,783	-		HP15_4092	0.58	+0.7
4,326,790	+		HP15_4092	0.59	-0.1
4,326,796	-		HP15_4092	0.59	+0.0
4,326,811	+		HP15_4092	0.62	+0.2
4,326,838	-		HP15_4092	0.65	-0.6
4,326,886	+		HP15_4092	0.72	+0.6
4,326,886	+		HP15_4092	0.72	-0.8
4,326,894	-		HP15_4092	0.73	-0.5
4,327,091	-				+0.9
4,327,098	+				-0.7
4,327,118	-				+0.4
4,327,173	+				+0.8
4,327,173	+				-0.7
4,327,186	+				-0.4
4,327,211	+				-0.2
4,327,224	-				-0.4
4,327,315	-				-0.9