Strain Fitness in Marinobacter adhaerens HP15 around HP15_3913

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
4,140,514	+				+0.2
4,140,558	-				+0.4
4,140,610	-		HP15_3912	0.11	-2.1
4,140,657	+		HP15_3912	0.15	-1.3
4,140,662	+		HP15_3912	0.16	-0.7
4,140,665	-		HP15_3912	0.16	-1.3
4,140,670	-		HP15_3912	0.17	+0.5
4,140,670	-		HP15_3912	0.17	+0.0
4,140,675	-		HP15_3912	0.17	+0.1
4,140,773	-		HP15_3912	0.27	-0.6
4,140,778	-		HP15_3912	0.27	-0.1
4,140,788	-		HP15_3912	0.28	-1.7
4,140,901	-		HP15_3912	0.39	+0.4
4,141,085	+		HP15_3912	0.58	-0.8
4,141,140	-		HP15_3912	0.63	+0.7
4,141,212	+		HP15_3912	0.70	-0.4
4,141,212	+		HP15_3912	0.70	+0.1
4,141,220	-		HP15_3912	0.71	-0.0
4,141,220	-		HP15_3912	0.71	-0.9
4,141,313	+		HP15_3912	0.80	+0.5
4,141,373	-		HP15_3912	0.86	-1.2
4,141,435	-				-1.6
4,141,448	+				-0.1
4,141,475	+				-0.1
4,141,567	+				-0.1
4,141,567	+				-0.5
4,141,636	+		HP15_3913	0.11	+0.1
4,141,643	+		HP15_3913	0.12	-0.2
4,141,648	+		HP15_3913	0.12	-0.2
4,141,648	+		HP15_3913	0.12	+0.5
4,141,649	-		HP15_3913	0.12	-0.3
4,141,649	-		HP15_3913	0.12	+0.4
4,141,780	+		HP15_3913	0.21	+0.3
4,141,788	-		HP15_3913	0.22	-0.2
4,141,796	+		HP15_3913	0.22	+0.8
4,141,806	+		HP15_3913	0.23	+0.1
4,141,822	+		HP15_3913	0.24	-0.8
4,141,828	-		HP15_3913	0.25	+0.3
4,141,830	-		HP15_3913	0.25	-1.1
4,142,364	-		HP15_3913	0.62	-1.5
4,142,387	-		HP15_3913	0.64	-0.5
4,142,478	-		HP15_3913	0.70	+0.3
4,142,489	+		HP15_3913	0.71	+0.1
4,142,497	-		HP15_3913	0.72	-0.7
4,142,503	-		HP15_3913	0.72	+0.0
4,142,614	+		HP15_3913	0.80	+0.5
4,142,616	+		HP15_3913	0.80	-0.8
4,142,817	-				-0.4
4,142,818	+				-0.8
4,142,831	-				+0.1
4,142,843	+				+0.5
4,142,888	+				-0.8
4,142,910	-				+0.1
4,142,910	-				-0.3
4,143,099	+		HP15_3914	0.14	-0.4
4,143,154	-		HP15_3914	0.21	+0.6
4,143,207	-		HP15_3914	0.27	-0.8
4,143,234	+		HP15_3914	0.30	-0.5
4,143,242	+		HP15_3914	0.31	+1.5
4,143,273	+		HP15_3914	0.34	-0.6
4,143,281	-		HP15_3914	0.35	+0.9
4,143,480	-		HP15_3914	0.57	+2.0
4,143,593	-		HP15_3914	0.70	+0.8
4,143,627	+		HP15_3914	0.74	-0.3
4,143,868	+				+0.3
4,143,868	+				-0.0
4,143,876	-				-0.1
4,143,876	-				-1.0