Strain Fitness in Marinobacter adhaerens HP15 around HP15_3808

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
4,032,293	-		HP15_3807	0.23	+1.8
4,032,303	-		HP15_3807	0.24	-0.1
4,032,358	+		HP15_3807	0.29	-1.0
4,032,614	-		HP15_3807	0.53	-0.3
4,032,653	-		HP15_3807	0.56	-0.2
4,032,668	-		HP15_3807	0.58	+0.6
4,032,812	+		HP15_3807	0.71	+0.6
4,032,820	-		HP15_3807	0.72	-2.4
4,032,820	-		HP15_3807	0.72	-0.1
4,032,848	+		HP15_3807	0.75	-0.3
4,032,928	+		HP15_3807	0.82	+0.1
4,032,951	+		HP15_3807	0.84	+0.6
4,033,048	-				-0.3
4,033,059	-				+0.1
4,033,267	-				-0.6
4,033,340	-				-0.2
4,033,399	+				-1.1
4,033,407	-				-0.0
4,033,435	+				+0.1
4,033,493	-				+0.5
4,033,557	-				+1.3
4,033,602	-				-0.9
4,033,602	-				+0.6
4,033,624	+				-1.2
4,033,665	-		HP15_3808	0.11	-2.2
4,033,696	-		HP15_3808	0.12	-2.0
4,033,706	-		HP15_3808	0.12	-0.2
4,033,786	-		HP15_3808	0.14	+1.0
4,033,792	-		HP15_3808	0.15	-0.2
4,033,792	-		HP15_3808	0.15	-0.2
4,033,945	-		HP15_3808	0.19	+0.6
4,033,985	-		HP15_3808	0.20	-0.3
4,034,005	-		HP15_3808	0.21	-0.5
4,034,086	-		HP15_3808	0.23	+2.0
4,034,108	+		HP15_3808	0.24	+1.0
4,034,142	-		HP15_3808	0.25	-0.9
4,034,195	+		HP15_3808	0.26	+0.3
4,034,249	-		HP15_3808	0.28	+0.1
4,034,287	-		HP15_3808	0.29	+1.5
4,034,366	-		HP15_3808	0.31	-0.3
4,034,406	-		HP15_3808	0.32	-0.4
4,034,426	-		HP15_3808	0.33	+0.6
4,034,464	+		HP15_3808	0.34	-0.3
4,034,472	-		HP15_3808	0.34	-0.5
4,034,474	+		HP15_3808	0.34	+0.2
4,034,475	+		HP15_3808	0.34	+0.8
4,034,495	-		HP15_3808	0.35	+0.8
4,034,521	-		HP15_3808	0.35	+1.6
4,034,726	+		HP15_3808	0.41	+0.4
4,034,747	-		HP15_3808	0.42	+0.6
4,034,811	+		HP15_3808	0.44	-0.4
4,034,819	-		HP15_3808	0.44	+0.7
4,034,819	-		HP15_3808	0.44	+0.9
4,034,819	-		HP15_3808	0.44	-0.1
4,034,985	-		HP15_3808	0.49	+0.1
4,035,099	+		HP15_3808	0.52	-0.8
4,035,289	-		HP15_3808	0.57	+0.9
4,035,395	+		HP15_3808	0.60	+1.1
4,035,474	+		HP15_3808	0.63	-0.1
4,035,474	+		HP15_3808	0.63	+0.6
4,035,482	-		HP15_3808	0.63	+0.1
4,035,583	+		HP15_3808	0.66	-0.1
4,035,627	-		HP15_3808	0.67	-1.0
4,035,627	-		HP15_3808	0.67	+0.3
4,035,658	+		HP15_3808	0.68	+0.1
4,035,666	-		HP15_3808	0.68	+0.3
4,035,666	-		HP15_3808	0.68	+0.5
4,035,726	-		HP15_3808	0.70	+0.8
4,035,787	+		HP15_3808	0.72	+2.4
4,035,847	+		HP15_3808	0.73	+0.5
4,035,855	-		HP15_3808	0.74	-0.4
4,035,855	-		HP15_3808	0.74	+1.2
4,035,855	-		HP15_3808	0.74	+0.8
4,035,867	+		HP15_3808	0.74	+0.0
4,035,952	+		HP15_3808	0.76	-0.6
4,036,047	+		HP15_3808	0.79	-1.0
4,036,054	+		HP15_3808	0.79	-0.3
4,036,162	-		HP15_3808	0.82	-0.5
4,036,167	-		HP15_3808	0.82	-0.6
4,036,187	-		HP15_3808	0.83	+0.4
4,036,195	-		HP15_3808	0.83	-0.1
4,036,218	+		HP15_3808	0.84	+1.5
4,036,222	+		HP15_3808	0.84	-0.3
4,036,232	+		HP15_3808	0.84	+2.1
4,036,240	-		HP15_3808	0.85	-1.0
4,036,361	+		HP15_3808	0.88	-1.6
4,036,376	+		HP15_3808	0.88	-0.6
4,036,376	+		HP15_3808	0.88	-0.5
4,036,384	-		HP15_3808	0.89	+1.5
4,036,384	-		HP15_3808	0.89	+0.2
4,036,403	+		HP15_3808	0.89	+0.5
4,036,411	-		HP15_3808	0.89	+0.6
4,036,424	+		HP15_3808	0.90	+0.5
4,036,442	-				+0.6
4,036,557	-				+0.7
4,036,618	-				+0.5
4,036,669	-				-0.4
4,036,692	+				-0.6
4,036,740	+				+0.4
4,036,752	+				-0.5
4,036,755	-				-0.2
4,036,771	+				-0.2
4,036,916	+		HP15_3809	0.21	+0.7
4,036,924	+		HP15_3809	0.23	-0.7
4,036,959	+		HP15_3809	0.29	+0.4
4,036,964	+		HP15_3809	0.30	-0.4
4,036,985	+		HP15_3809	0.33	+1.2
4,036,993	-		HP15_3809	0.35	+0.0
4,037,335	-				+0.4
4,037,454	+		HP15_3810	0.16	-0.0
4,037,538	-		HP15_3810	0.37	+0.9
4,037,556	-		HP15_3810	0.41	-0.1
4,037,611	-		HP15_3810	0.54	+0.5
4,037,618	+		HP15_3810	0.56	-1.8
4,037,779	+				-0.0
4,037,780	+				-2.1