Strain Fitness in Marinobacter adhaerens HP15 around HP15_323

Experiment: monoculture; Experiment C, time point 3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_322 and HP15_323 are separated by 22 nucleotidesHP15_323 and HP15_324 overlap by 4 nucleotidesHP15_324 and HP15_325 are separated by 59 nucleotides HP15_322: HP15_322 - glucose-6-phosphate isomerase, at 318,318 to 319,979 _322 HP15_323: HP15_323 - pantothenate synthetase, at 320,002 to 320,850 _323 HP15_324: HP15_324 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 320,847 to 321,641 _324 HP15_325: HP15_325 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 321,701 to 322,198 _325 Position (kb) 320 321Strain fitness (log2 ratio) -1 0 1 2at 319.985 kb on - strandat 321.670 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment C, time point 3
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319,985 - -1.0
321,670 - +2.7

Or see this region's nucleotide sequence