Strain Fitness in Marinobacter adhaerens HP15 around HP15_133

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
138,440	-				+2.3
138,457	+				+0.3
138,574	+		HP15_132	0.16	+0.3
138,637	+		HP15_132	0.23	+0.9
138,642	-		HP15_132	0.23	+1.0
138,645	-		HP15_132	0.23	+0.2
138,680	+		HP15_132	0.27	+0.0
138,693	-		HP15_132	0.28	+1.0
138,698	-		HP15_132	0.29	-0.2
138,698	-		HP15_132	0.29	-0.2
138,707	+		HP15_132	0.30	+0.3
138,849	+		HP15_132	0.45	-1.0
138,995	+		HP15_132	0.60	-1.3
139,003	-		HP15_132	0.61	+0.5
139,019	+		HP15_132	0.62	+0.2
139,050	-		HP15_132	0.66	+0.1
139,102	-		HP15_132	0.71	+0.1
139,158	+		HP15_132	0.77	-0.8
139,169	-		HP15_132	0.78	-0.2
139,191	+		HP15_132	0.80	+0.1
139,199	-		HP15_132	0.81	-0.5
139,226	-		HP15_132	0.84	+0.8
139,245	-		HP15_132	0.86	-0.4
139,272	-		HP15_132	0.89	-3.1
139,312	+				-0.1
139,320	-				-0.1
139,352	-				-0.0
139,365	+				-0.2
139,373	-				-0.0
139,373	-				-0.4
139,409	-				-0.5
139,409	-				-0.4
139,414	-				+0.6
139,460	+		HP15_133	0.10	+1.8
139,468	-		HP15_133	0.11	+0.0
139,468	-		HP15_133	0.11	-1.9
139,468	-		HP15_133	0.11	+0.0
139,545	-		HP15_133	0.22	-0.3
139,568	+		HP15_133	0.25	+0.1
139,729	-		HP15_133	0.47	+0.8
139,745	-		HP15_133	0.49	+0.3
139,834	-		HP15_133	0.61	-0.0
139,976	+		HP15_133	0.80	+0.3
139,984	-		HP15_133	0.81	-0.1
139,997	-		HP15_133	0.83	+0.8
140,010	+		HP15_133	0.85	-1.1
140,010	+		HP15_133	0.85	-0.7
140,010	+		HP15_133	0.85	+0.6
140,010	+		HP15_133	0.85	-0.0
140,018	-		HP15_133	0.86	-0.5
140,124	+				+1.1
140,189	-				-1.8
140,203	+				-0.6
140,211	-				-1.0
140,217	+				+0.3
140,236	+				+3.7
140,244	-				+1.6
140,273	+				-0.2
140,345	-				-1.0
140,416	+		HP15_134	0.14	-0.6
140,664	-		HP15_134	0.44	+0.3
140,666	+		HP15_134	0.44	-0.4
140,734	+		HP15_134	0.52	-0.0
140,734	+		HP15_134	0.52	-1.3
140,749	+		HP15_134	0.54	+0.9
140,757	-		HP15_134	0.55	-0.5
140,849	+		HP15_134	0.66	-1.5
140,900	+		HP15_134	0.72	+0.7
140,900	+		HP15_134	0.72	-0.5
140,900	+		HP15_134	0.72	+0.3
140,900	+		HP15_134	0.72	+0.3
140,905	+		HP15_134	0.73	+0.3
140,908	-		HP15_134	0.73	+0.6
140,908	-		HP15_134	0.73	+0.3
140,908	-		HP15_134	0.73	-0.1
140,937	+		HP15_134	0.77	+0.4
140,955	+		HP15_134	0.79	+1.0
140,955	+		HP15_134	0.79	+1.7
140,955	+		HP15_134	0.79	-0.1
140,963	-		HP15_134	0.80	+0.1
140,963	-		HP15_134	0.80	+0.4
140,963	-		HP15_134	0.80	+0.4
141,002	+		HP15_134	0.85	+1.0
141,081	+				-0.9