Strain Fitness in Marinobacter adhaerens HP15 around HP15_490
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
|---|---|---|---|---|---|
| remove | |||||
| 503,954 | + | HP15_488 | 0.46 | -1.5 | |
| 503,995 | + | HP15_488 | 0.48 | +0.8 | |
| 504,014 | + | HP15_488 | 0.49 | +0.9 | |
| 504,216 | - | HP15_488 | 0.62 | -0.1 | |
| 504,308 | + | HP15_488 | 0.67 | +0.9 | |
| 504,333 | + | HP15_488 | 0.69 | +0.3 | |
| 504,333 | + | HP15_488 | 0.69 | -1.2 | |
| 504,346 | - | HP15_488 | 0.69 | +0.9 | |
| 504,346 | - | HP15_488 | 0.69 | -0.1 | |
| 504,369 | - | HP15_488 | 0.71 | +0.5 | |
| 504,543 | - | HP15_488 | 0.81 | +0.0 | |
| 504,703 | + | +0.2 | |||
| 504,713 | + | -0.3 | |||
| 504,835 | + | -0.5 | |||
| 504,843 | - | +0.3 | |||
| 504,913 | + | +0.1 | |||
| 504,921 | - | -0.4 | |||
| 504,944 | - | +0.2 | |||
| 504,997 | + | HP15_490 | 0.15 | +1.7 | |
| 505,005 | - | HP15_490 | 0.18 | -0.8 | |
| 505,005 | - | HP15_490 | 0.18 | +0.5 | |
| 505,019 | + | HP15_490 | 0.23 | +1.6 | |
| 505,027 | + | HP15_490 | 0.26 | +0.5 | |
| 505,042 | + | HP15_490 | 0.31 | +0.3 | |
| 505,050 | - | HP15_490 | 0.34 | +0.3 | |
| 505,100 | + | HP15_490 | 0.52 | +1.1 | |
| 505,143 | - | HP15_490 | 0.67 | -0.1 |
Or see this region's nucleotide sequence