Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g114

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
110,201	-		HP15_p187g113	0.54	-0.1
110,228	-		HP15_p187g113	0.56	+0.7
110,266	-		HP15_p187g113	0.57	-2.6
110,271	-		HP15_p187g113	0.58	+0.6
110,305	-		HP15_p187g113	0.59	-1.0
110,305	-		HP15_p187g113	0.59	-0.2
110,321	+		HP15_p187g113	0.60	+1.0
110,321	+		HP15_p187g113	0.60	+0.2
110,321	+		HP15_p187g113	0.60	+0.3
110,321	+		HP15_p187g113	0.60	-0.1
110,321	+		HP15_p187g113	0.60	+0.7
110,324	-		HP15_p187g113	0.60	-1.3
110,326	+		HP15_p187g113	0.60	-0.6
110,329	-		HP15_p187g113	0.60	+0.4
110,379	-		HP15_p187g113	0.63	+0.7
110,384	-		HP15_p187g113	0.63	+0.1
110,384	-		HP15_p187g113	0.63	-0.3
110,386	+		HP15_p187g113	0.63	+1.0
110,395	+		HP15_p187g113	0.64	-0.2
110,396	+		HP15_p187g113	0.64	-0.1
110,396	+		HP15_p187g113	0.64	+0.2
110,396	+		HP15_p187g113	0.64	+0.6
110,396	+		HP15_p187g113	0.64	+0.6
110,403	-		HP15_p187g113	0.64	+0.1
110,403	-		HP15_p187g113	0.64	+1.7
110,429	-		HP15_p187g113	0.65	-0.2
110,437	+		HP15_p187g113	0.66	-0.7
110,440	-		HP15_p187g113	0.66	-0.1
110,458	+		HP15_p187g113	0.67	+0.3
110,458	+		HP15_p187g113	0.67	+0.6
110,458	+		HP15_p187g113	0.67	+0.4
110,466	-		HP15_p187g113	0.67	+0.3
110,466	-		HP15_p187g113	0.67	-0.3
110,534	+		HP15_p187g113	0.70	+0.2
110,542	-		HP15_p187g113	0.71	+0.2
110,562	-		HP15_p187g113	0.72	+0.3
110,562	-		HP15_p187g113	0.72	+0.3
110,567	-		HP15_p187g113	0.72	-0.3
110,623	+		HP15_p187g113	0.75	-0.3
110,653	+		HP15_p187g113	0.76	+0.0
110,653	+		HP15_p187g113	0.76	-0.4
110,658	+		HP15_p187g113	0.76	+0.2
110,661	-		HP15_p187g113	0.76	-0.1
110,808	+		HP15_p187g113	0.83	+0.3
110,890	-		HP15_p187g113	0.87	+0.5
110,942	+		HP15_p187g113	0.90	+0.8
110,952	+				+0.8
110,960	-				+0.5
110,998	+				-0.6
111,010	+				+0.1
111,027	+				+0.0
111,028	+				+0.1
111,037	-				+0.4
111,051	-				+0.1
111,068	-				+0.1
111,105	-				+0.1
111,163	+				+0.8
111,168	+				-0.7
111,168	+				-0.4
111,191	+				+0.2
111,204	-				+0.6
111,211	-				-0.3
111,211	-				-0.6
111,288	-				+0.1
111,327	+				+0.4
111,345	+		HP15_p187g114	0.11	-0.9
111,347	-		HP15_p187g114	0.11	-0.5
111,352	-		HP15_p187g114	0.11	+0.1
111,353	-		HP15_p187g114	0.11	+0.4
111,361	+		HP15_p187g114	0.12	+1.1
111,421	-		HP15_p187g114	0.15	+0.5
111,482	+		HP15_p187g114	0.18	-0.8
111,525	+		HP15_p187g114	0.21	-0.1
111,525	+		HP15_p187g114	0.21	-2.0
111,535	+		HP15_p187g114	0.21	+0.6
111,538	-		HP15_p187g114	0.22	-0.1
111,540	+		HP15_p187g114	0.22	-1.4
111,543	-		HP15_p187g114	0.22	-1.0
111,543	-		HP15_p187g114	0.22	-0.2
111,593	-		HP15_p187g114	0.25	+0.4
111,593	-		HP15_p187g114	0.25	+0.3
111,633	-		HP15_p187g114	0.27	-0.5
111,633	-		HP15_p187g114	0.27	-0.2
111,633	-		HP15_p187g114	0.27	+0.1
111,641	-		HP15_p187g114	0.27	+0.3
111,679	+		HP15_p187g114	0.29	-0.4
111,687	-		HP15_p187g114	0.30	-1.2
111,687	-		HP15_p187g114	0.30	-0.2
111,725	-		HP15_p187g114	0.32	+1.1
111,733	-		HP15_p187g114	0.32	+0.8
111,741	+		HP15_p187g114	0.33	+0.4
111,796	-		HP15_p187g114	0.36	+0.1
111,807	+		HP15_p187g114	0.36	-0.4
111,829	+		HP15_p187g114	0.38	+0.1
111,853	+		HP15_p187g114	0.39	+3.6
111,863	-		HP15_p187g114	0.39	+0.2
111,879	-		HP15_p187g114	0.40	+0.3
111,927	-		HP15_p187g114	0.43	-1.2
111,936	+		HP15_p187g114	0.44	+0.4
111,939	-		HP15_p187g114	0.44	-1.7
111,939	-		HP15_p187g114	0.44	-1.0
111,944	-		HP15_p187g114	0.44	+0.2
111,952	-		HP15_p187g114	0.44	+1.3
112,024	+		HP15_p187g114	0.48	-0.7
112,034	-		HP15_p187g114	0.49	-0.2
112,159	-		HP15_p187g114	0.56	+0.6
112,174	+		HP15_p187g114	0.57	+0.2
112,216	-		HP15_p187g114	0.59	+0.4
112,229	+		HP15_p187g114	0.60	-0.6
112,229	-		HP15_p187g114	0.60	-0.7
112,229	-		HP15_p187g114	0.60	+0.0
112,236	-		HP15_p187g114	0.60	+0.3
112,237	-		HP15_p187g114	0.60	+1.9
112,239	+		HP15_p187g114	0.60	+0.0
112,258	+		HP15_p187g114	0.61	+0.0
112,266	-		HP15_p187g114	0.62	-0.4
112,268	-		HP15_p187g114	0.62	+0.9
112,310	+		HP15_p187g114	0.64	+0.4
112,310	+		HP15_p187g114	0.64	+0.8
112,310	+		HP15_p187g114	0.64	-0.2
112,318	-		HP15_p187g114	0.65	-0.1
112,318	-		HP15_p187g114	0.65	+0.8
112,353	-		HP15_p187g114	0.67	-0.3
112,353	-		HP15_p187g114	0.67	+0.9
112,368	+		HP15_p187g114	0.67	+0.1
112,368	+		HP15_p187g114	0.67	+0.3
112,376	-		HP15_p187g114	0.68	+0.3
112,479	+		HP15_p187g114	0.74	-0.5
112,488	+		HP15_p187g114	0.74	+0.0
112,508	+		HP15_p187g114	0.75	+0.1
112,509	+		HP15_p187g114	0.75	-0.1
112,517	-		HP15_p187g114	0.76	+0.9
112,517	-		HP15_p187g114	0.76	-0.1
112,555	-		HP15_p187g114	0.78	-0.0
112,577	-		HP15_p187g114	0.79	-1.0
112,631	+		HP15_p187g114	0.82	+0.5
112,639	-		HP15_p187g114	0.82	-0.5
112,639	-		HP15_p187g114	0.82	+0.1
112,639	-		HP15_p187g114	0.82	-0.0
112,650	-		HP15_p187g114	0.83	+1.9
112,685	+		HP15_p187g114	0.85	+0.2
112,717	+		HP15_p187g114	0.87	+0.4
112,717	+		HP15_p187g114	0.87	+0.1
112,717	+		HP15_p187g114	0.87	-0.3
112,725	-		HP15_p187g114	0.87	+0.8
112,725	-		HP15_p187g114	0.87	+0.1
112,735	-		HP15_p187g114	0.88	-0.1
112,751	+		HP15_p187g114	0.89	+0.0
112,753	-		HP15_p187g114	0.89	+0.5
112,753	-		HP15_p187g114	0.89	-1.4
112,868	-				-0.2
112,909	+				-0.5
112,914	-				+2.5
112,919	-				-0.3
112,952	+				-0.1
112,958	+				+0.0
112,960	+				+0.2
112,960	-				-1.5
112,968	-				+0.2
113,044	-				-0.2
113,104	+				-0.1
113,105	-				-0.1
113,110	-				-0.4
113,118	-				-0.5
113,131	-				+0.3
113,139	+				-0.3
113,153	+				-0.7
113,153	+				-0.2
113,153	+				+0.0
113,153	+				-0.1
113,153	+				-0.7
113,161	-				-0.7
113,161	-				-1.5
113,161	-				-0.2
113,161	-				+0.7
113,161	-				-0.1
113,161	-				-0.2
113,170	+				+0.3
113,170	+				-0.1
113,178	-				-2.5
113,178	-				+0.0
113,188	-				+0.7
113,212	+				+1.7
113,220	-				+1.1
113,223	+				+0.1
113,252	+				+0.3
113,285	+				-0.1
113,327	+				+0.2
113,335	-				+0.5
113,335	-				+0.6
113,358	-				-0.3
113,375	+				+0.2
113,407	-				+0.3
113,409	+				+0.1
113,508	+				-0.5
113,544	-				+0.9
113,591	-				+0.6
113,624	+				-0.6
113,652	+				+0.8
113,652	+				+0.7
113,652	+				+0.3
113,652	+				-0.0
113,652	+				+1.3
113,652	+				-1.6
113,652	+				+0.3
113,652	+				+0.7
113,659	+				+0.3
113,660	-				+0.4
113,660	-				+0.9
113,660	-				-0.4
113,660	-				+0.1
113,660	-				+0.3
113,660	-				+0.1
113,667	-				-0.1
113,667	-				+0.0
113,667	-				+0.6
113,678	+				-0.3
113,693	+				-0.1
113,706	+				+0.5
113,716	+				+0.3
113,739	-				+0.3
113,745	+				+0.4
113,748	-				+1.3
113,819	-				+0.7
113,840	+				+0.5
113,840	+				-0.6
113,843	-				+0.2
113,843	-				-2.4
113,848	-				-2.4
113,848	-				+0.5
113,858	-				+1.7
113,861	-				+1.0
113,889	-				-1.0
113,890	-				+0.5
113,907	+				+0.7
113,915	-				-0.0
113,930	+				+0.1