Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g112

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
107,305	+		HP15_p187g111	0.63	-0.1
107,305	+		HP15_p187g111	0.63	+0.8
107,323	-		HP15_p187g111	0.64	+0.3
107,371	-		HP15_p187g111	0.66	+0.5
107,410	+		HP15_p187g111	0.68	+0.1
107,535	+		HP15_p187g111	0.73	-0.7
107,543	-		HP15_p187g111	0.73	+0.4
107,575	-		HP15_p187g111	0.74	-1.9
107,668	-		HP15_p187g111	0.78	-0.1
107,668	-		HP15_p187g111	0.78	-0.1
107,690	+		HP15_p187g111	0.79	-0.1
107,690	-		HP15_p187g111	0.79	-1.4
107,765	-		HP15_p187g111	0.82	-0.3
107,765	-		HP15_p187g111	0.82	-0.0
107,765	-		HP15_p187g111	0.82	-0.0
107,765	-		HP15_p187g111	0.82	-1.0
107,765	-		HP15_p187g111	0.82	+2.0
107,765	-		HP15_p187g111	0.82	+0.4
107,790	+		HP15_p187g111	0.83	-0.2
107,793	+		HP15_p187g111	0.83	+0.2
107,826	-		HP15_p187g111	0.84	-1.7
107,873	-		HP15_p187g111	0.86	+0.7
107,908	+		HP15_p187g111	0.87	-0.7
107,975	-				+0.0
107,979	-				-0.7
108,001	-				+0.1
108,034	-				+0.2
108,044	+				-0.2
108,093	+				-0.3
108,110	-				+0.7
108,156	-				-0.3
108,209	-				+1.0
108,220	-				+0.0
108,234	+				+0.3
108,295	-				+0.0
108,295	-				+0.7
108,303	+		HP15_p187g112	0.11	+0.4
108,313	+		HP15_p187g112	0.12	+2.0
108,314	+		HP15_p187g112	0.13	-0.1
108,321	-		HP15_p187g112	0.14	+0.5
108,338	-		HP15_p187g112	0.17	-0.3
108,502	+		HP15_p187g112	0.45	-0.4
108,502	+		HP15_p187g112	0.45	-0.1
108,519	+		HP15_p187g112	0.48	-0.1
108,520	-		HP15_p187g112	0.49	+1.0
108,527	-		HP15_p187g112	0.50	+0.6
108,527	-		HP15_p187g112	0.50	+0.8
108,594	+		HP15_p187g112	0.61	-0.9
108,602	-		HP15_p187g112	0.63	+0.1
108,608	+		HP15_p187g112	0.64	-0.0
108,608	+		HP15_p187g112	0.64	-0.0
108,616	-		HP15_p187g112	0.65	-2.0
108,662	-		HP15_p187g112	0.73	-0.0
108,665	+		HP15_p187g112	0.74	-0.3
108,668	-		HP15_p187g112	0.74	+1.4
108,673	-		HP15_p187g112	0.75	+0.3
108,695	+		HP15_p187g112	0.79	+2.4
108,708	+		HP15_p187g112	0.81	-0.1
108,717	+		HP15_p187g112	0.83	-0.2
108,728	+		HP15_p187g112	0.85	+0.7
108,754	+		HP15_p187g112	0.89	+0.6
108,810	-				-0.3
108,810	-				+1.0
108,812	+				+0.4
108,812	+				-0.4
108,812	+				+0.1
108,820	-				+0.4
108,887	-				+0.7
108,952	+				+0.3
108,977	+				+0.3
109,006	-				-0.6
109,020	-				+0.5
109,034	+				+0.4
109,037	-				+0.2
109,037	-				-0.2
109,056	-				+1.6
109,061	-				+0.2
109,090	+				+1.8
109,098	-				+0.3
109,119	-				+0.1
109,123	-				+0.6
109,154	+				-1.1
109,154	-				-1.2
109,154	-				-0.8
109,182	-				+0.5
109,197	-				+0.0
109,197	-				-0.3
109,266	+				-0.5
109,266	-				-1.0
109,290	+		HP15_p187g113	0.11	-1.7
109,298	-		HP15_p187g113	0.11	-0.1
109,298	-		HP15_p187g113	0.11	+0.9
109,308	-		HP15_p187g113	0.12	+0.3
109,309	+		HP15_p187g113	0.12	+0.6
109,309	+		HP15_p187g113	0.12	+1.1
109,319	-		HP15_p187g113	0.12	-0.6
109,341	+		HP15_p187g113	0.13	+1.8
109,349	-		HP15_p187g113	0.13	-0.0
109,349	-		HP15_p187g113	0.13	+0.3
109,378	-		HP15_p187g113	0.15	-0.1
109,380	+		HP15_p187g113	0.15	+0.2
109,380	+		HP15_p187g113	0.15	-1.4
109,380	+		HP15_p187g113	0.15	-0.2
109,383	-		HP15_p187g113	0.15	-0.3
109,388	-		HP15_p187g113	0.15	+0.7
109,388	-		HP15_p187g113	0.15	+0.2
109,388	-		HP15_p187g113	0.15	-1.3
109,398	-		HP15_p187g113	0.16	+0.3
109,437	-		HP15_p187g113	0.18	-0.8
109,458	-		HP15_p187g113	0.19	-0.5
109,458	-		HP15_p187g113	0.19	+0.7
109,507	+		HP15_p187g113	0.21	-0.4
109,512	-		HP15_p187g113	0.21	-0.1
109,519	+		HP15_p187g113	0.22	+0.7
109,519	+		HP15_p187g113	0.22	+0.1
109,618	+		HP15_p187g113	0.26	+0.4
109,633	+		HP15_p187g113	0.27	+0.1
109,703	-		HP15_p187g113	0.30	+0.0
109,758	-		HP15_p187g113	0.33	+0.4
109,787	+		HP15_p187g113	0.34	-0.1