Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g12

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
8,434	+				-0.4
8,434	+				+0.2
8,434	+				+0.9
8,442	-				+0.1
8,442	-				-1.1
8,445	+				-2.0
8,456	-				+0.4
8,515	-				-0.1
8,592	+				+0.7
8,592	+				-0.2
8,592	+				+0.3
8,592	+				-0.6
8,600	-				+0.8
8,600	-				+0.1
8,635	+		HP15_p187g11	0.14	-0.3
8,635	+		HP15_p187g11	0.14	+0.7
8,731	+		HP15_p187g11	0.25	+1.2
8,739	-		HP15_p187g11	0.26	-0.0
8,739	-		HP15_p187g11	0.26	+1.0
8,765	+		HP15_p187g11	0.29	+0.4
8,875	-		HP15_p187g11	0.41	+0.6
8,875	-		HP15_p187g11	0.41	-0.9
8,959	+		HP15_p187g11	0.51	+0.2
8,967	-		HP15_p187g11	0.52	+0.2
8,967	-		HP15_p187g11	0.52	-0.3
8,985	+		HP15_p187g11	0.54	-0.2
8,992	+		HP15_p187g11	0.55	+0.6
8,993	-		HP15_p187g11	0.55	+0.6
8,993	-		HP15_p187g11	0.55	-1.4
8,997	+		HP15_p187g11	0.55	+0.9
8,997	+		HP15_p187g11	0.55	+1.0
9,005	-		HP15_p187g11	0.56	+0.4
9,005	-		HP15_p187g11	0.56	+0.6
9,099	-		HP15_p187g11	0.67	+0.0
9,149	-		HP15_p187g11	0.73	-1.3
9,149	-		HP15_p187g11	0.73	-0.7
9,150	-		HP15_p187g11	0.73	+1.0
9,170	-		HP15_p187g11	0.75	-1.2
9,225	-		HP15_p187g11	0.81	-1.9
9,248	-		HP15_p187g11	0.84	-0.7
9,258	+		HP15_p187g11	0.85	+0.4
9,259	+		HP15_p187g11	0.85	-3.0
9,266	-		HP15_p187g11	0.86	-0.1
9,267	-		HP15_p187g11	0.86	+0.8
9,461	+				+1.0
9,461	+				-0.5
9,461	+				-0.9
9,469	-				+0.2
9,488	+				-0.2
9,496	-		HP15_p187g12	0.10	+0.0
9,501	+		HP15_p187g12	0.11	-0.0
9,544	+		HP15_p187g12	0.17	+1.5
9,604	+		HP15_p187g12	0.25	+0.5
9,612	-		HP15_p187g12	0.26	-0.6
9,640	-		HP15_p187g12	0.30	+1.0
9,647	+		HP15_p187g12	0.31	+0.2
9,711	-		HP15_p187g12	0.40	+0.2
9,714	+		HP15_p187g12	0.40	-0.8
9,818	+		HP15_p187g12	0.55	+0.4
9,818	+		HP15_p187g12	0.55	+1.1
9,826	-		HP15_p187g12	0.56	-0.1
9,827	-		HP15_p187g12	0.56	+0.2
9,909	+		HP15_p187g12	0.67	+0.3
9,909	+		HP15_p187g12	0.67	+1.2
9,917	-		HP15_p187g12	0.68	+0.5
9,981	-		HP15_p187g12	0.77	+0.1
9,981	-		HP15_p187g12	0.77	-1.4
9,991	-		HP15_p187g12	0.79	+1.6
9,991	-		HP15_p187g12	0.79	+1.3
10,010	+		HP15_p187g12	0.81	+0.7
10,061	-		HP15_p187g12	0.88	+0.7
10,111	+				+0.2
10,163	-				+0.6
10,178	-				-0.2
10,192	+				+0.5
10,235	-				-1.0
10,248	+				+0.4
10,255	-				+0.3
10,265	-				+0.1
10,309	-				+0.7
10,343	-				-0.2
10,349	+				-0.5
10,349	+				+3.1
10,349	+				+0.5
10,349	+				+1.1
10,349	+				+0.5
10,357	-				-0.2
10,375	+				+0.8
10,383	+				+0.0
10,391	-				-0.1
10,425	-				+0.5
10,449	+				+0.5
10,534	-				-0.2
10,598	+				+0.7
10,611	-		HP15_p187g13	0.10	+2.3
10,613	-		HP15_p187g13	0.10	-0.4
10,637	+		HP15_p187g13	0.12	+0.1
10,654	-		HP15_p187g13	0.13	-0.9
10,737	+		HP15_p187g13	0.17	+0.2
10,755	-		HP15_p187g13	0.18	-0.1
10,773	+		HP15_p187g13	0.19	+0.3
10,773	+		HP15_p187g13	0.19	+0.4
10,773	+		HP15_p187g13	0.19	-0.4
10,781	-		HP15_p187g13	0.20	-0.5
10,808	+		HP15_p187g13	0.21	+0.4
10,872	-		HP15_p187g13	0.25	-0.3
10,872	-		HP15_p187g13	0.25	+0.2
10,906	-		HP15_p187g13	0.27	-0.2
10,913	+		HP15_p187g13	0.27	+0.4
10,914	-		HP15_p187g13	0.27	+0.5
10,921	-		HP15_p187g13	0.27	-0.2
10,943	+		HP15_p187g13	0.29	+1.1
10,943	+		HP15_p187g13	0.29	+0.6
10,951	-		HP15_p187g13	0.29	+0.8
10,951	-		HP15_p187g13	0.29	+0.3
10,951	-		HP15_p187g13	0.29	+0.2
11,015	+		HP15_p187g13	0.33	+0.0
11,023	+		HP15_p187g13	0.33	+0.4
11,023	-		HP15_p187g13	0.33	-0.4
11,023	-		HP15_p187g13	0.33	-0.5
11,053	-		HP15_p187g13	0.35	-0.2
11,053	-		HP15_p187g13	0.35	+0.3
11,053	-		HP15_p187g13	0.35	+0.2
11,063	-		HP15_p187g13	0.35	-0.7