Strain Fitness in Marinobacter adhaerens HP15 around HP15_p42g14
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
9,268 | - | -0.7 | |||
9,308 | - | -0.8 | |||
9,318 | - | +0.5 | |||
9,365 | - | HP15_p42g14 | 0.14 | -0.6 | |
9,410 | - | HP15_p42g14 | 0.50 | -0.7 | |
9,452 | + | HP15_p42g14 | 0.85 | -1.1 | |
9,483 | + | -0.1 | |||
9,491 | - | -0.4 | |||
9,494 | + | +0.0 | |||
9,494 | + | -0.5 | |||
9,499 | + | -0.2 | |||
9,499 | + | -0.2 | |||
9,542 | + | +1.4 | |||
9,695 | + | +1.6 | |||
9,702 | + | +0.7 | |||
9,702 | + | +1.3 | |||
9,702 | + | +1.5 | |||
9,710 | - | -0.2 | |||
9,710 | - | -0.2 | |||
9,710 | - | +0.6 | |||
9,731 | - | HP15_p42g15 | 0.11 | +0.2 | |
9,758 | + | HP15_p42g15 | 0.14 | +1.3 | |
9,780 | - | HP15_p42g15 | 0.16 | +0.4 | |
9,827 | + | HP15_p42g15 | 0.21 | +2.2 | |
9,828 | - | HP15_p42g15 | 0.21 | -0.1 | |
9,852 | + | HP15_p42g15 | 0.23 | +1.1 | |
9,903 | - | HP15_p42g15 | 0.28 | -0.2 | |
10,014 | + | HP15_p42g15 | 0.39 | +0.7 | |
10,043 | + | HP15_p42g15 | 0.41 | +1.8 | |
10,066 | - | HP15_p42g15 | 0.44 | -1.1 | |
10,145 | - | HP15_p42g15 | 0.51 | -0.8 | |
10,189 | + | HP15_p42g15 | 0.56 | +1.6 | |
10,199 | - | HP15_p42g15 | 0.57 | -0.7 | |
10,244 | + | HP15_p42g15 | 0.61 | +1.3 | |
10,253 | - | HP15_p42g15 | 0.62 | -0.0 | |
10,298 | + | HP15_p42g15 | 0.66 | +1.8 | |
10,412 | + | HP15_p42g15 | 0.77 | +1.5 | |
10,412 | + | HP15_p42g15 | 0.77 | +1.1 |
Or see this region's nucleotide sequence