Strain Fitness in Marinobacter adhaerens HP15 around HP15_4041

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
4,275,390	-				+0.3
4,275,404	+		HP15_4040	0.10	-1.3
4,275,413	-		HP15_4040	0.11	+0.2
4,275,639	+		HP15_4040	0.35	+0.0
4,275,668	+		HP15_4040	0.39	-0.1
4,275,668	+		HP15_4040	0.39	-0.1
4,275,671	-		HP15_4040	0.39	-0.0
4,275,707	-		HP15_4040	0.43	-0.1
4,275,717	+		HP15_4040	0.44	-0.5
4,275,827	-		HP15_4040	0.56	+0.7
4,276,012	+		HP15_4040	0.76	-0.5
4,276,130	-		HP15_4040	0.89	+0.8
4,276,151	+				+0.8
4,276,192	+				-1.8
4,276,194	+				+0.1
4,276,195	-				-0.2
4,276,198	+				+0.1
4,276,200	-				+0.1
4,276,211	+				-0.6
4,276,211	+				-0.5
4,276,211	+				-0.0
4,276,219	-				+0.2
4,276,251	+				-0.2
4,276,309	-				-0.1
4,276,397	-		HP15_4041	0.16	+0.9
4,276,483	-		HP15_4041	0.25	+0.3
4,276,499	+		HP15_4041	0.26	+1.6
4,276,555	-		HP15_4041	0.32	+0.0
4,276,592	-		HP15_4041	0.35	+0.3
4,276,670	+		HP15_4041	0.43	+0.8
4,276,678	-		HP15_4041	0.44	+1.3
4,276,732	-		HP15_4041	0.49	-0.2
4,276,893	+		HP15_4041	0.65	+1.8
4,276,963	+		HP15_4041	0.71	-0.4
4,276,972	-		HP15_4041	0.72	+0.3
4,277,129	+		HP15_4041	0.88	+0.8
4,277,251	+				+0.3
4,277,259	-				-0.4
4,277,292	+				-0.5
4,277,302	+				-0.2
4,277,313	+				-0.1
4,277,315	+				-0.3
4,277,315	+				+0.5
4,277,315	+				+0.4
4,277,323	-				-0.5
4,277,345	-		HP15_4042	0.13	+0.7
4,277,350	-		HP15_4042	0.13	+1.1
4,277,364	+		HP15_4042	0.15	+0.7
4,277,410	-		HP15_4042	0.22	-0.4
4,277,429	-		HP15_4042	0.24	+0.2
4,277,442	+		HP15_4042	0.26	-0.8
4,277,491	-		HP15_4042	0.33	-1.0
4,277,554	+		HP15_4042	0.41	+0.4
4,277,653	-		HP15_4042	0.55	+0.0
4,277,667	-		HP15_4042	0.57	+0.3
4,277,772	-		HP15_4042	0.71	-1.1
4,277,815	+		HP15_4042	0.77	+0.1
4,277,892	+		HP15_4042	0.88	-0.4
4,277,966	+				-0.2
4,278,084	+				-0.1
4,278,137	-		HP15_4043	0.13	-0.1