Strain Fitness in Marinobacter adhaerens HP15 around HP15_3912

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
4,139,517	+		HP15_3910	0.37	+0.8
4,139,526	-		HP15_3910	0.38	-0.0
4,139,648	+		HP15_3910	0.49	+0.3
4,139,675	+		HP15_3910	0.51	+0.0
4,139,675	+		HP15_3910	0.51	+1.3
4,139,683	-		HP15_3910	0.52	-0.4
4,139,838	-		HP15_3910	0.66	+0.9
4,139,843	+		HP15_3910	0.66	-0.3
4,139,865	+		HP15_3910	0.68	-1.4
4,139,865	+		HP15_3910	0.68	-0.1
4,139,880	+		HP15_3910	0.69	-0.2
4,139,893	-		HP15_3910	0.70	+1.0
4,139,977	-		HP15_3910	0.78	-0.2
4,139,988	+		HP15_3910	0.79	-0.5
4,139,991	-		HP15_3910	0.79	+0.7
4,140,138	+				-0.0
4,140,146	-				-2.2
4,140,164	+				-0.5
4,140,164	+				+0.2
4,140,172	-				-0.7
4,140,225	+				+0.2
4,140,225	+				-0.0
4,140,233	-				+0.1
4,140,243	-				-0.6
4,140,253	-				+0.3
4,140,299	+				+0.5
4,140,514	+				-0.9
4,140,558	-				-0.7
4,140,610	-		HP15_3912	0.11	+0.5
4,140,657	+		HP15_3912	0.15	-0.4
4,140,662	+		HP15_3912	0.16	-1.0
4,140,665	-		HP15_3912	0.16	+0.3
4,140,670	-		HP15_3912	0.17	-0.1
4,140,670	-		HP15_3912	0.17	-0.3
4,140,675	-		HP15_3912	0.17	-0.2
4,140,773	-		HP15_3912	0.27	-0.7
4,140,778	-		HP15_3912	0.27	+0.1
4,140,788	-		HP15_3912	0.28	-0.8
4,140,901	-		HP15_3912	0.39	-0.4
4,141,085	+		HP15_3912	0.58	-0.8
4,141,140	-		HP15_3912	0.63	+0.1
4,141,212	+		HP15_3912	0.70	-0.5
4,141,212	+		HP15_3912	0.70	-0.1
4,141,220	-		HP15_3912	0.71	+0.2
4,141,220	-		HP15_3912	0.71	-0.7
4,141,313	+		HP15_3912	0.80	+0.4
4,141,373	-		HP15_3912	0.86	-1.8
4,141,435	-				+0.3
4,141,448	+				-0.8
4,141,475	+				+0.2
4,141,567	+				+0.1
4,141,567	+				-0.5
4,141,636	+		HP15_3913	0.11	+0.6
4,141,643	+		HP15_3913	0.12	-0.9
4,141,648	+		HP15_3913	0.12	-0.4
4,141,648	+		HP15_3913	0.12	+0.1
4,141,649	-		HP15_3913	0.12	+0.8
4,141,649	-		HP15_3913	0.12	-0.1
4,141,780	+		HP15_3913	0.21	-0.5
4,141,788	-		HP15_3913	0.22	+0.1
4,141,796	+		HP15_3913	0.22	+0.6
4,141,806	+		HP15_3913	0.23	+0.2
4,141,822	+		HP15_3913	0.24	+0.1
4,141,828	-		HP15_3913	0.25	-0.0
4,141,830	-		HP15_3913	0.25	+0.1
4,142,364	-		HP15_3913	0.62	-1.2
4,142,387	-		HP15_3913	0.64	+0.1
4,142,478	-		HP15_3913	0.70	+0.1
4,142,489	+		HP15_3913	0.71	+0.8
4,142,497	-		HP15_3913	0.72	-0.1
4,142,503	-		HP15_3913	0.72	-0.9