Strain Fitness in Marinobacter adhaerens HP15 around HP15_3885

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
4,114,431	-		HP15_3884	0.49	+0.7
4,114,503	+		HP15_3884	0.53	+1.1
4,114,659	+		HP15_3884	0.62	-0.0
4,114,677	-		HP15_3884	0.63	+0.3
4,114,713	-		HP15_3884	0.66	-0.9
4,114,762	-		HP15_3884	0.68	+0.2
4,114,794	-		HP15_3884	0.70	+0.2
4,114,802	-		HP15_3884	0.71	+0.6
4,114,860	-		HP15_3884	0.74	+1.0
4,114,871	+		HP15_3884	0.75	-0.5
4,114,879	-		HP15_3884	0.75	+1.0
4,114,905	+		HP15_3884	0.77	-1.1
4,114,905	+		HP15_3884	0.77	+0.4
4,114,907	+		HP15_3884	0.77	-0.6
4,114,913	-		HP15_3884	0.78	-0.8
4,114,913	-		HP15_3884	0.78	-0.7
4,114,924	+		HP15_3884	0.78	+0.2
4,114,924	+		HP15_3884	0.78	+0.0
4,114,924	+		HP15_3884	0.78	-1.0
4,114,924	+		HP15_3884	0.78	-0.5
4,114,932	-		HP15_3884	0.79	+0.1
4,114,932	-		HP15_3884	0.79	-0.3
4,114,946	-		HP15_3884	0.79	-0.6
4,114,946	-		HP15_3884	0.79	+0.2
4,114,964	+		HP15_3884	0.81	-0.3
4,115,039	+		HP15_3884	0.85	+0.2
4,115,047	-		HP15_3884	0.86	-0.8
4,115,054	+		HP15_3884	0.86	+0.6
4,115,092	-		HP15_3884	0.88	+0.3
4,115,138	-				+0.5
4,115,258	+				-1.3
4,115,268	-				-0.3
4,115,341	-				+0.4
4,115,434	+				+0.6
4,115,442	-				-0.1
4,115,442	-				+2.2
4,115,442	-				-0.4
4,115,457	-				+0.4
4,115,483	+				-0.5
4,115,491	-				-0.3
4,115,491	-				+0.7
4,115,503	-				-0.7
4,115,550	-		HP15_3885	0.15	+1.6
4,115,555	-		HP15_3885	0.16	+1.1
4,115,646	+		HP15_3885	0.26	+1.2
4,116,002	+		HP15_3885	0.68	+0.9
4,116,087	+		HP15_3885	0.78	+0.1
4,116,087	+				-1.6
4,116,112	+		HP15_3885	0.81	-0.6
4,116,112	+		HP15_3885	0.81	-0.5
4,116,160	+		HP15_3885	0.87	-0.1
4,116,164	-		HP15_3885	0.87	+0.6
4,116,176	+		HP15_3885	0.89	+0.1
4,116,181	+		HP15_3885	0.89	+2.6
4,116,268	-				+0.3
4,116,268	-				+1.2
4,116,427	-				-0.6
4,116,682	-		HP15_3886	0.10	+0.3
4,116,701	-		HP15_3886	0.13	-1.4
4,116,711	-		HP15_3886	0.14	-2.0
4,116,716	-		HP15_3886	0.15	-0.9
4,116,716	-		HP15_3886	0.15	+0.4
4,116,822	+		HP15_3886	0.29	-0.4
4,116,899	-		HP15_3886	0.39	-1.4
4,116,899	-		HP15_3886	0.39	-2.3
4,116,947	-		HP15_3886	0.46	-1.9
4,116,994	-		HP15_3886	0.52	-1.1
4,117,046	+		HP15_3886	0.59	-0.9
4,117,054	-		HP15_3886	0.60	+0.0
4,117,060	+		HP15_3886	0.61	-0.1
4,117,076	+		HP15_3886	0.63	-1.3
4,117,190	+		HP15_3886	0.79	-2.3
4,117,217	-		HP15_3886	0.82	-2.2
4,117,221	+		HP15_3886	0.83	-1.5
4,117,238	+		HP15_3886	0.85	+0.9
4,117,246	-		HP15_3886	0.86	-2.5
4,117,246	-		HP15_3886	0.86	-2.7
4,117,257	+		HP15_3886	0.88	-1.9