Strain Fitness in Marinobacter adhaerens HP15 around HP15_3705
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
3,909,073 | + | HP15_3704 | 0.36 | -0.2 | |
3,909,210 | - | HP15_3704 | 0.46 | -0.4 | |
3,909,210 | - | HP15_3704 | 0.46 | -1.2 | |
3,909,210 | - | HP15_3704 | 0.46 | -1.3 | |
3,909,316 | + | HP15_3704 | 0.55 | -0.6 | |
3,909,320 | + | HP15_3704 | 0.55 | -2.5 | |
3,909,418 | - | HP15_3704 | 0.63 | +0.7 | |
3,909,876 | + | -0.9 | |||
3,909,878 | + | -0.1 | |||
3,909,935 | - | -0.7 | |||
3,910,183 | + | HP15_3705 | 0.14 | +0.3 | |
3,910,191 | + | HP15_3705 | 0.15 | -0.3 | |
3,910,345 | + | HP15_3705 | 0.28 | +1.1 | |
3,910,410 | + | HP15_3705 | 0.34 | -1.3 | |
3,910,574 | + | HP15_3705 | 0.49 | -1.1 | |
3,910,806 | + | HP15_3705 | 0.69 | -1.2 | |
3,911,019 | + | HP15_3705 | 0.88 | -1.9 | |
3,911,080 | + | -1.7 | |||
3,911,080 | + | -2.9 | |||
3,911,092 | + | -1.6 | |||
3,911,192 | + | -0.9 |
Or see this region's nucleotide sequence