Strain Fitness in Marinobacter adhaerens HP15 around HP15_3390

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,559,045	+				+0.6
3,559,177	+		HP15_3390	0.18	-2.7
3,559,177	+		HP15_3390	0.18	-2.4
3,559,177	+		HP15_3390	0.18	-1.8
3,559,234	-		HP15_3390	0.32	-3.8
3,559,248	-		HP15_3390	0.36	-3.5
3,559,398	+		HP15_3390	0.73	-1.4
3,559,398	+		HP15_3390	0.73	-2.6
3,559,398	+		HP15_3390	0.73	-3.6
3,559,406	-		HP15_3390	0.75	-2.9
3,559,518	+				+0.4
3,559,522	+				-0.4
3,559,640	+		HP15_3391	0.12	-0.1
3,559,694	-		HP15_3391	0.18	-2.4
3,559,701	+		HP15_3391	0.18	-0.2
3,559,701	+		HP15_3391	0.18	-0.7
3,559,717	-		HP15_3391	0.20	-0.1
3,559,717	-		HP15_3391	0.20	-0.1
3,559,810	-		HP15_3391	0.29	+0.8
3,559,818	-		HP15_3391	0.30	-2.6
3,559,927	-		HP15_3391	0.41	-0.8
3,559,996	+		HP15_3391	0.48	+0.6
3,559,996	+		HP15_3391	0.48	-0.3
3,560,004	-		HP15_3391	0.49	+0.1
3,560,004	-		HP15_3391	0.49	-0.7
3,560,036	+		HP15_3391	0.52	+0.3
3,560,189	-		HP15_3391	0.67	+0.2
3,560,227	+		HP15_3391	0.71	-0.2
3,560,235	-		HP15_3391	0.72	-0.1
3,560,345	-		HP15_3391	0.83	-0.5
3,560,389	-		HP15_3391	0.88	-2.6
3,560,439	-				+1.2