Strain Fitness in Marinobacter adhaerens HP15 around HP15_3365

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,527,398	-		HP15_3363	0.60	+1.2
3,527,457	+		HP15_3363	0.63	+0.2
3,527,478	+		HP15_3363	0.64	-0.8
3,527,523	+		HP15_3363	0.67	-1.4
3,527,527	-		HP15_3363	0.67	-0.3
3,527,629	+		HP15_3363	0.73	-1.3
3,527,631	-		HP15_3363	0.73	+0.0
3,527,647	+		HP15_3363	0.74	-0.6
3,527,678	+		HP15_3363	0.76	+0.6
3,527,763	+		HP15_3363	0.81	+0.5
3,527,793	+		HP15_3363	0.83	+0.0
3,527,929	-				+0.1
3,527,995	-				+0.3
3,528,073	-				-0.8
3,528,333	+				+0.2
3,528,369	-				+0.6
3,528,389	-				-0.2
3,528,468	+				+0.6
3,528,480	+				-0.4
3,528,494	-				+0.9
3,528,508	-				-1.1
3,528,534	+				+0.7
3,528,576	+		HP15_3365	0.12	-0.2
3,528,725	-		HP15_3365	0.18	+0.7
3,528,725	-		HP15_3365	0.18	+0.5
3,528,996	+		HP15_3365	0.29	+1.1
3,529,043	-		HP15_3365	0.31	+0.9
3,529,043	-		HP15_3365	0.31	+0.4
3,529,199	+		HP15_3365	0.37	+0.5
3,529,202	-		HP15_3365	0.38	+0.4
3,529,213	+		HP15_3365	0.38	+0.1
3,529,281	+		HP15_3365	0.41	+0.5
3,529,287	+		HP15_3365	0.41	+0.4
3,529,287	+		HP15_3365	0.41	+0.5
3,529,316	-		HP15_3365	0.42	+0.7
3,529,373	+		HP15_3365	0.45	+0.3
3,529,401	-		HP15_3365	0.46	+1.1
3,529,411	-		HP15_3365	0.46	+0.5
3,529,435	+		HP15_3365	0.47	+1.3
3,529,490	-		HP15_3365	0.49	+0.4
3,529,561	-		HP15_3365	0.52	-0.1
3,529,591	-		HP15_3365	0.54	-0.4
3,529,635	-		HP15_3365	0.55	-0.2
3,529,642	-		HP15_3365	0.56	-0.4
3,529,924	+		HP15_3365	0.67	+0.9
3,529,932	-		HP15_3365	0.68	+0.8
3,529,994	-		HP15_3365	0.70	+0.5
3,530,152	-		HP15_3365	0.77	+0.2
3,530,251	+		HP15_3365	0.81	+1.0
3,530,322	+		HP15_3365	0.84	-0.1
3,530,322	+		HP15_3365	0.84	+0.2
3,530,365	-		HP15_3365	0.86	+0.4
3,530,434	+		HP15_3365	0.89	-1.2
3,530,627	-				-0.0
3,530,672	-				-0.5
3,530,688	-				-0.2
3,530,699	+				+0.2
3,530,708	-				+0.4
3,530,708	-				+0.8
3,530,710	+				+0.2
3,530,713	-				-0.0
3,530,823	+				-0.2
3,530,899	+				-0.3
3,530,907	-				-0.9
3,530,907	-				-0.1
3,530,926	-				-1.0
3,530,995	+		HP15_3366	0.11	-0.4
3,530,995	+		HP15_3366	0.11	+0.2
3,530,995	+		HP15_3366	0.11	-0.2
3,530,995	+		HP15_3366	0.11	-0.4
3,531,003	-		HP15_3366	0.11	-0.3
3,531,003	-		HP15_3366	0.11	-0.7
3,531,003	-		HP15_3366	0.11	-0.5
3,531,015	-		HP15_3366	0.12	-0.2
3,531,032	+		HP15_3366	0.12	-0.3
3,531,040	-		HP15_3366	0.13	+0.3
3,531,040	-		HP15_3366	0.13	-0.4
3,531,040	-		HP15_3366	0.13	-1.2
3,531,040	-		HP15_3366	0.13	-0.2
3,531,045	-		HP15_3366	0.13	+1.1
3,531,137	-		HP15_3366	0.16	+0.2
3,531,179	+		HP15_3366	0.18	+2.1
3,531,211	+		HP15_3366	0.19	-1.1
3,531,243	+		HP15_3366	0.20	-0.7
3,531,244	+		HP15_3366	0.20	+0.1
3,531,290	+		HP15_3366	0.22	-0.1
3,531,303	+		HP15_3366	0.22	-0.3
3,531,331	+		HP15_3366	0.23	+1.8
3,531,331	+		HP15_3366	0.23	+1.5
3,531,339	-		HP15_3366	0.24	-0.0
3,531,339	-		HP15_3366	0.24	-0.1
3,531,371	-		HP15_3366	0.25	+0.3
3,531,430	+		HP15_3366	0.27	-0.2
3,531,456	-		HP15_3366	0.28	+0.1
3,531,517	-		HP15_3366	0.30	-0.5
3,531,588	-		HP15_3366	0.33	-0.5