Strain Fitness in Marinobacter adhaerens HP15 around HP15_3355

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,515,827	-				+0.2
3,515,834	+				+0.4
3,515,842	-				+0.3
3,515,880	+				+0.2
3,515,888	+				+0.3
3,516,036	+		HP15_3354	0.21	-0.6
3,516,131	+		HP15_3354	0.34	-1.9
3,516,281	-		HP15_3354	0.56	-0.9
3,516,307	-		HP15_3354	0.60	-1.1
3,516,319	-		HP15_3354	0.62	+0.1
3,516,341	+		HP15_3354	0.65	-2.1
3,516,418	-		HP15_3354	0.76	-1.9
3,516,609	+				+0.5
3,516,740	-				-0.4
3,516,888	-		HP15_3355	0.19	-1.7
3,516,930	-		HP15_3355	0.22	-1.4
3,517,062	+		HP15_3355	0.32	+0.0
3,517,216	+		HP15_3355	0.44	-0.4
3,517,294	+		HP15_3355	0.50	+0.4
3,517,417	-		HP15_3355	0.59	-0.3
3,517,644	+		HP15_3355	0.76	+0.1
3,517,743	-		HP15_3355	0.84	+0.2
3,518,244	-		HP15_3356	0.33	+0.4
3,518,257	+		HP15_3356	0.35	+0.2
3,518,271	-		HP15_3356	0.36	+0.7
3,518,279	+		HP15_3356	0.37	+1.2
3,518,298	+		HP15_3356	0.40	+0.2
3,518,315	-		HP15_3356	0.41	-0.1
3,518,347	-		HP15_3356	0.45	+0.2
3,518,347	-		HP15_3356	0.45	+0.1
3,518,357	+		HP15_3356	0.46	+0.3
3,518,831	+				-0.3
3,518,831	+				-0.8