Strain Fitness in Marinobacter adhaerens HP15 around HP15_3207

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,358,264	+		HP15_3205	0.39	-0.6
3,358,292	-		HP15_3205	0.44	-1.6
3,358,292	-		HP15_3205	0.44	-2.2
3,358,383	+		HP15_3205	0.60	-1.3
3,358,445	+		HP15_3205	0.71	-0.8
3,358,453	-		HP15_3205	0.72	-1.9
3,358,460	+		HP15_3205	0.73	-0.4
3,358,463	-		HP15_3205	0.74	-1.0
3,358,478	-		HP15_3205	0.77	-1.6
3,358,587	+				+0.6
3,358,630	+				-0.5
3,358,630	+				+0.0
3,358,638	-				+0.4
3,358,638	-				-1.0
3,358,717	-		HP15_3206	0.16	-1.5
3,358,795	+		HP15_3206	0.28	-1.4
3,358,926	+		HP15_3206	0.49	-0.7
3,358,934	-		HP15_3206	0.50	-0.7
3,358,934	-		HP15_3206	0.50	-2.2
3,358,946	-		HP15_3206	0.52	-1.1
3,359,028	-		HP15_3206	0.65	-2.1
3,359,075	+		HP15_3206	0.73	-0.4
3,359,078	-		HP15_3206	0.73	+0.8
3,359,134	+		HP15_3206	0.82	-0.0
3,359,303	-				-1.0
3,359,404	-		HP15_3207	0.22	-1.3
3,359,483	+		HP15_3207	0.34	-2.1
3,359,483	+		HP15_3207	0.34	-3.0
3,359,483	+		HP15_3207	0.34	-0.5
3,359,554	+		HP15_3207	0.44	-1.3
3,359,554	+		HP15_3207	0.44	-2.3
3,359,562	-		HP15_3207	0.46	+0.7
3,359,583	-		HP15_3207	0.49	-1.0
3,359,583	-		HP15_3207	0.49	-0.8
3,359,621	+		HP15_3207	0.55	-0.3
3,359,629	-		HP15_3207	0.56	-1.0
3,359,645	+		HP15_3207	0.58	-0.7
3,359,653	-		HP15_3207	0.59	-2.0
3,359,689	+		HP15_3207	0.65	-1.3
3,359,697	-		HP15_3207	0.66	-0.6
3,359,844	+		HP15_3207	0.88	-1.3
3,359,901	+				-1.1
3,359,950	+				-0.6
3,359,955	+				-1.2
3,359,986	+				-0.8
3,359,989	-				-1.6
3,360,005	-				+0.2
3,360,030	+				-1.2
3,360,045	-				-0.1
3,360,067	-		HP15_3208	0.12	-2.6
3,360,081	+		HP15_3208	0.13	-0.8
3,360,081	+		HP15_3208	0.13	-1.3
3,360,081	+		HP15_3208	0.13	+0.5
3,360,089	-		HP15_3208	0.13	-1.7
3,360,127	+		HP15_3208	0.16	-1.4
3,360,135	-		HP15_3208	0.17	-1.2
3,360,135	-		HP15_3208	0.17	-4.4
3,360,135	-		HP15_3208	0.17	-1.0
3,360,135	-		HP15_3208	0.17	-1.3
3,360,137	+		HP15_3208	0.17	-2.5
3,360,214	-		HP15_3208	0.23	-0.8
3,360,267	+		HP15_3208	0.27	-1.7
3,360,303	+		HP15_3208	0.30	-1.4
3,360,303	+		HP15_3208	0.30	-1.6
3,360,323	-		HP15_3208	0.32	-0.5
3,360,324	-		HP15_3208	0.32	-2.2
3,360,333	-		HP15_3208	0.33	-0.4
3,360,333	-		HP15_3208	0.33	-3.8
3,360,362	+		HP15_3208	0.35	+1.6
3,360,370	-		HP15_3208	0.35	-1.1
3,360,421	+		HP15_3208	0.39	-2.5
3,360,425	-		HP15_3208	0.40	-0.5
3,360,511	+		HP15_3208	0.47	-1.0
3,360,529	-		HP15_3208	0.48	-1.3
3,360,682	-		HP15_3208	0.60	-0.7
3,360,794	+		HP15_3208	0.69	-1.3
3,360,802	-		HP15_3208	0.69	-2.7
3,360,866	-		HP15_3208	0.74	-1.4
3,360,902	+		HP15_3208	0.77	-0.6