Strain Fitness in Marinobacter adhaerens HP15 around HP15_3123

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,275,432	-		HP15_3122	0.27	-0.2
3,275,543	-		HP15_3122	0.36	-0.4
3,275,561	-		HP15_3122	0.37	+0.8
3,275,579	-		HP15_3122	0.38	+0.3
3,275,698	+		HP15_3122	0.48	+0.6
3,275,726	+		HP15_3122	0.50	-0.7
3,275,726	+		HP15_3122	0.50	-0.0
3,275,726	-		HP15_3122	0.50	+0.4
3,275,734	-		HP15_3122	0.51	-0.1
3,275,750	+		HP15_3122	0.52	-0.1
3,275,752	+		HP15_3122	0.52	-1.2
3,275,770	-		HP15_3122	0.54	-0.4
3,275,783	-		HP15_3122	0.55	+0.4
3,275,837	-		HP15_3122	0.59	-0.5
3,275,845	+		HP15_3122	0.60	-0.9
3,275,845	+		HP15_3122	0.60	+0.3
3,275,845	+		HP15_3122	0.60	+1.2
3,275,853	-		HP15_3122	0.60	-0.9
3,276,046	-		HP15_3122	0.76	-0.5
3,276,123	+		HP15_3122	0.82	-0.3
3,276,163	+		HP15_3122	0.85	+0.3
3,276,163	+		HP15_3122	0.85	-1.1
3,276,163	+		HP15_3122	0.85	+0.0
3,276,163	+		HP15_3122	0.85	+0.4
3,276,163	+		HP15_3122	0.85	+0.4
3,276,163	+		HP15_3122	0.85	+0.3
3,276,186	+		HP15_3122	0.87	+1.0
3,276,275	+				+0.0
3,276,275	+				+0.1
3,276,275	+				-0.3
3,276,283	-				+0.2
3,276,304	-				-2.3
3,276,304	-				-1.6
3,276,309	-				-0.2
3,276,309	-				-0.3
3,276,314	-				-1.6
3,276,314	-				+0.0
3,276,327	+				-0.0
3,276,327	-				-0.3
3,276,410	-				-1.0
3,276,551	+		HP15_3123	0.19	-1.2
3,276,863	-		HP15_3123	0.51	+0.8
3,276,967	-		HP15_3123	0.62	+0.2
3,277,207	-		HP15_3123	0.86	-2.1
3,277,298	-				-1.8
3,277,335	+				+0.1
3,277,335	+				-0.4
3,277,372	-				-0.1
3,277,440	+				+0.6
3,277,443	-				-0.7
3,277,448	-		HP15_3124	0.11	-1.2
3,277,471	+		HP15_3124	0.14	-0.0
3,277,478	+		HP15_3124	0.15	-0.3
3,277,495	+		HP15_3124	0.17	-1.0
3,277,702	-		HP15_3124	0.44	-0.2
3,277,779	+		HP15_3124	0.54	+0.1
3,277,782	-		HP15_3124	0.54	-0.4
3,277,787	-		HP15_3124	0.55	-0.7
3,277,787	-		HP15_3124	0.55	+1.4
3,277,853	-		HP15_3124	0.64	-0.2
3,277,883	-		HP15_3124	0.67	+1.3
3,277,921	+		HP15_3124	0.72	-0.3
3,277,935	-		HP15_3124	0.74	-1.4
3,278,009	-		HP15_3124	0.84	-0.1
3,278,060	+				+0.8
3,278,068	-				-0.6
3,278,068	-				-0.3
3,278,068	-				+0.7
3,278,147	-				-0.1
3,278,192	-				+0.7