Strain Fitness in Marinobacter adhaerens HP15 around HP15_3121

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,272,424	+		HP15_3120	0.42	-0.1
3,272,450	+		HP15_3120	0.44	-0.2
3,272,643	-		HP15_3120	0.60	+1.0
3,272,650	-		HP15_3120	0.61	-0.6
3,272,765	+		HP15_3120	0.70	+0.8
3,272,765	+		HP15_3120	0.70	+1.0
3,272,765	+		HP15_3120	0.70	-1.8
3,272,829	+		HP15_3120	0.75	-1.3
3,272,903	-		HP15_3120	0.81	-0.6
3,272,927	-		HP15_3120	0.83	+0.2
3,272,997	-		HP15_3120	0.89	+1.0
3,273,007	-		HP15_3120	0.90	+0.1
3,273,014	+				+0.1
3,273,096	+				+0.2
3,273,162	+				+0.7
3,273,169	-				+2.7
3,273,170	-				+0.2
3,273,261	+				-0.3
3,273,269	-				-0.3
3,273,269	-				-0.3
3,273,342	+				+0.8
3,273,386	-				-1.5
3,273,704	-		HP15_3121	0.28	-0.8
3,273,740	+		HP15_3121	0.30	-0.4
3,273,848	+		HP15_3121	0.38	-2.3
3,273,918	+		HP15_3121	0.42	-1.0
3,274,148	-		HP15_3121	0.58	-0.2
3,274,223	-		HP15_3121	0.63	-1.6
3,274,375	-		HP15_3121	0.73	-1.5
3,274,434	-		HP15_3121	0.77	-1.8
3,274,454	-		HP15_3121	0.78	+0.2
3,274,459	-		HP15_3121	0.79	-1.2
3,274,536	-		HP15_3121	0.84	-0.2
3,274,614	-		HP15_3121	0.89	-0.4
3,274,624	-		HP15_3121	0.90	-3.2
3,274,647	-				-0.6
3,274,647	-				+1.5
3,274,795	-				-0.5
3,274,828	-				+1.5
3,275,002	+				-0.7
3,275,015	+				+0.3
3,275,023	-				+0.2
3,275,039	+				-0.9
3,275,069	-				-0.4
3,275,077	+				+0.8
3,275,174	-				-0.8
3,275,184	+				+0.3
3,275,184	+				+0.2
3,275,189	+				-0.2
3,275,189	+				+0.3
3,275,219	+				-0.4
3,275,259	-		HP15_3122	0.13	+0.1
3,275,342	+		HP15_3122	0.20	-2.3
3,275,432	-		HP15_3122	0.27	-0.2
3,275,543	-		HP15_3122	0.36	-0.4
3,275,561	-		HP15_3122	0.37	+0.8
3,275,579	-		HP15_3122	0.38	+0.3
3,275,698	+		HP15_3122	0.48	+0.6
3,275,726	+		HP15_3122	0.50	-0.7
3,275,726	+		HP15_3122	0.50	-0.0
3,275,726	-		HP15_3122	0.50	+0.4
3,275,734	-		HP15_3122	0.51	-0.1
3,275,750	+		HP15_3122	0.52	-0.1
3,275,752	+		HP15_3122	0.52	-1.2
3,275,770	-		HP15_3122	0.54	-0.4