Strain Fitness in Marinobacter adhaerens HP15 around HP15_2967

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,110,458	-		HP15_2965	0.72	+1.2
3,110,521	-		HP15_2965	0.80	-2.0
3,110,530	+		HP15_2965	0.81	-1.2
3,110,585	-		HP15_2965	0.88	-0.7
3,110,777	+		HP15_2966	0.15	-0.3
3,110,829	-		HP15_2966	0.24	-0.9
3,110,891	+		HP15_2966	0.35	+0.2
3,110,899	-		HP15_2966	0.36	-0.3
3,110,954	-		HP15_2966	0.45	-0.1
3,110,987	+		HP15_2966	0.51	+0.2
3,110,987	+		HP15_2966	0.51	-0.7
3,111,002	+		HP15_2966	0.53	-2.0
3,111,165	-		HP15_2966	0.81	-0.3
3,111,227	+				+2.1
3,111,242	+				-1.5
3,111,242	+				-0.4
3,111,247	+				-0.3
3,111,389	-				-0.1
3,111,434	-				-2.6
3,111,468	-				-0.4
3,111,483	-				-0.6
3,111,488	-				-0.1
3,111,517	+				-0.4
3,111,517	+				-0.2
3,111,517	+				+0.5
3,111,517	+				+0.2
3,111,534	+		HP15_2967	0.12	+0.5
3,111,546	+		HP15_2967	0.13	+0.8
3,111,546	+		HP15_2967	0.13	+0.7
3,111,559	-		HP15_2967	0.15	+1.3
3,111,585	-		HP15_2967	0.18	-0.2
3,111,599	+		HP15_2967	0.19	+0.2
3,111,633	+		HP15_2967	0.23	+1.3
3,111,678	+		HP15_2967	0.29	+0.2
3,111,777	+		HP15_2967	0.41	-0.5
3,111,795	+		HP15_2967	0.43	-0.6
3,111,857	+		HP15_2967	0.50	-1.5
3,111,909	-		HP15_2967	0.57	+0.5
3,111,909	-		HP15_2967	0.57	+0.4
3,111,988	+		HP15_2967	0.66	-0.2
3,111,996	-		HP15_2967	0.67	-0.2
3,112,068	-		HP15_2967	0.76	+1.3
3,112,087	+		HP15_2967	0.78	+0.5
3,112,105	-		HP15_2967	0.80	+0.0
3,112,138	-		HP15_2967	0.84	+0.7
3,112,143	-		HP15_2967	0.85	-0.7
3,112,143	-		HP15_2967	0.85	-0.1
3,112,270	-				+0.0
3,112,313	+				+0.7
3,112,473	+				-0.3
3,112,649	-		HP15_2968	0.16	-0.3
3,112,726	-		HP15_2968	0.21	+0.0
3,112,849	+		HP15_2968	0.29	-1.0
3,112,883	+		HP15_2968	0.31	+0.4
3,112,883	+		HP15_2968	0.31	+2.5
3,112,891	-		HP15_2968	0.31	-0.3
3,112,894	+		HP15_2968	0.31	-1.9
3,112,902	-		HP15_2968	0.32	-0.1
3,112,960	+		HP15_2968	0.36	-1.5
3,112,996	-		HP15_2968	0.38	+0.7