Strain Fitness in Marinobacter adhaerens HP15 around HP15_2697
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
2,849,046 | + | HP15_2696 | 0.50 | -1.2 | |
2,849,100 | + | HP15_2696 | 0.55 | +1.4 | |
2,849,134 | - | HP15_2696 | 0.57 | -0.6 | |
2,849,254 | + | HP15_2696 | 0.66 | -0.2 | |
2,849,256 | - | HP15_2696 | 0.67 | -0.5 | |
2,849,303 | + | HP15_2696 | 0.70 | +0.5 | |
2,849,311 | - | HP15_2696 | 0.71 | -0.1 | |
2,849,491 | + | HP15_2696 | 0.84 | -2.1 | |
2,849,545 | + | HP15_2696 | 0.89 | +0.4 | |
2,849,616 | + | -0.3 | |||
2,849,634 | - | +0.4 | |||
2,849,689 | - | +0.8 | |||
2,849,716 | - | -0.9 | |||
2,849,814 | - | -0.2 | |||
2,849,976 | + | -2.3 | |||
2,849,985 | + | -1.8 | |||
2,849,993 | - | +0.0 | |||
2,850,001 | - | +0.1 | |||
2,850,065 | + | -0.4 | |||
2,850,180 | + | HP15_2697 | 0.16 | -0.1 | |
2,850,241 | - | HP15_2697 | 0.22 | -0.4 | |
2,850,305 | + | HP15_2697 | 0.28 | -1.8 | |
2,850,323 | - | HP15_2697 | 0.30 | -1.0 | |
2,850,923 | - | +0.5 | |||
2,850,967 | + | +0.5 | |||
2,851,100 | - | HP15_2698 | 0.24 | -2.4 | |
2,851,178 | - | HP15_2698 | 0.52 | -0.3 | |
2,851,307 | + | -0.0 | |||
2,851,315 | - | +0.4 | |||
2,851,315 | - | +1.8 | |||
2,851,356 | + | -2.6 | |||
2,851,453 | + | HP15_2699 | 0.17 | -0.9 | |
2,851,592 | + | HP15_2699 | 0.35 | -2.1 | |
2,851,939 | - | HP15_2699 | 0.80 | -0.6 | |
2,851,959 | - | HP15_2699 | 0.83 | -0.5 | |
2,851,988 | + | HP15_2699 | 0.87 | -2.6 |
Or see this region's nucleotide sequence