Strain Fitness in Marinobacter adhaerens HP15 around HP15_2604

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,752,998	+		HP15_2603	0.58	+0.1
2,753,001	-		HP15_2603	0.58	+0.5
2,753,024	-		HP15_2603	0.59	+0.2
2,753,074	+		HP15_2603	0.62	-0.5
2,753,074	+		HP15_2603	0.62	-0.0
2,753,082	-		HP15_2603	0.62	-0.6
2,753,082	-		HP15_2603	0.62	+0.3
2,753,086	+		HP15_2603	0.62	+0.0
2,753,171	-		HP15_2603	0.67	-0.9
2,753,411	-		HP15_2603	0.79	+0.2
2,753,470	-		HP15_2603	0.82	-1.1
2,753,579	+		HP15_2603	0.88	+0.7
2,753,671	+				+0.4
2,753,672	-				+0.4
2,753,848	-				-0.7
2,753,886	+				+2.4
2,753,887	+				+0.2
2,753,913	+				-0.6
2,753,921	-				+1.0
2,753,921	-				-0.1
2,753,932	+				-0.4
2,753,940	-				-0.6
2,753,961	-				-0.1
2,754,003	-				-0.4
2,754,101	+		HP15_2604	0.10	+0.1
2,754,160	+		HP15_2604	0.15	+0.6
2,754,160	+		HP15_2604	0.15	-0.1
2,754,168	-		HP15_2604	0.16	-0.1
2,754,213	+		HP15_2604	0.19	+1.0
2,754,260	+		HP15_2604	0.23	-0.8
2,754,429	+		HP15_2604	0.37	+0.8
2,754,437	-		HP15_2604	0.38	-1.6
2,754,486	+		HP15_2604	0.42	+0.7
2,754,881	-		HP15_2604	0.74	+0.4
2,754,884	+		HP15_2604	0.74	+0.5
2,754,892	-		HP15_2604	0.75	+0.6
2,755,030	-		HP15_2604	0.86	+0.1
2,755,117	+				-1.4
2,755,123	+				-0.1
2,755,131	-				-0.3
2,755,199	-				+0.3
2,755,206	-				+0.3
2,755,346	-				-0.4
2,755,346	-				+0.4
2,755,411	+				-0.8
2,755,455	+		HP15_2605	0.11	+0.3
2,755,455	+		HP15_2605	0.11	+0.1
2,755,463	-		HP15_2605	0.12	-0.6
2,755,622	+		HP15_2605	0.21	+0.7
2,755,707	-		HP15_2605	0.27	-0.1
2,755,812	-		HP15_2605	0.33	-0.1
2,755,822	-		HP15_2605	0.33	-0.3
2,755,835	-		HP15_2605	0.34	-0.7
2,755,841	-		HP15_2605	0.35	+0.5
2,755,854	-		HP15_2605	0.35	+1.0
2,755,942	-		HP15_2605	0.41	+0.1
2,756,038	-		HP15_2605	0.46	+0.4
2,756,056	+		HP15_2605	0.47	+1.4
2,756,056	+		HP15_2605	0.47	-0.1
2,756,107	+		HP15_2605	0.51	-0.2
2,756,115	-		HP15_2605	0.51	-2.5
2,756,156	-		HP15_2605	0.53	-1.3