Strain Fitness in Marinobacter adhaerens HP15 around HP15_2495
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
2,634,605 | - | HP15_2495 | 0.18 | -0.7 | |
2,634,605 | - | HP15_2495 | 0.18 | -8.9 | |
2,634,605 | - | HP15_2495 | 0.18 | -1.4 | |
2,634,697 | - | HP15_2495 | 0.26 | -5.9 | |
2,634,741 | - | HP15_2495 | 0.29 | -5.4 | |
2,634,835 | - | HP15_2495 | 0.37 | -6.9 | |
2,634,863 | - | HP15_2495 | 0.40 | -2.2 | |
2,634,867 | - | HP15_2495 | 0.40 | -3.2 | |
2,635,183 | - | HP15_2495 | 0.67 | -2.1 | |
2,635,185 | - | HP15_2495 | 0.67 | -4.5 | |
2,635,245 | - | HP15_2495 | 0.72 | -3.8 | |
2,635,507 | - | -3.7 | |||
2,635,747 | + | +0.2 | |||
2,635,755 | - | +0.1 | |||
2,635,953 | + | HP15_2496 | 0.24 | +0.3 | |
2,636,179 | + | HP15_2496 | 0.50 | +1.3 | |
2,636,187 | - | HP15_2496 | 0.51 | -0.4 | |
2,636,498 | - | HP15_2496 | 0.87 | -0.4 | |
2,636,516 | + | HP15_2496 | 0.89 | -0.4 |
Or see this region's nucleotide sequence