Strain Fitness in Marinobacter adhaerens HP15 around HP15_2427
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
2,567,327 | + | -0.2 | |||
2,567,381 | - | HP15_2426 | 0.12 | +0.3 | |
2,567,410 | + | HP15_2426 | 0.16 | +0.2 | |
2,567,428 | - | HP15_2426 | 0.19 | +0.1 | |
2,567,502 | + | HP15_2426 | 0.29 | +0.5 | |
2,567,502 | + | HP15_2426 | 0.29 | -0.4 | |
2,567,510 | - | HP15_2426 | 0.30 | +0.2 | |
2,567,510 | - | HP15_2426 | 0.30 | -1.0 | |
2,567,515 | - | HP15_2426 | 0.30 | -0.9 | |
2,567,696 | + | HP15_2426 | 0.55 | -0.1 | |
2,568,190 | - | -0.5 | |||
2,568,508 | - | HP15_2427 | 0.30 | -3.1 | |
2,568,559 | - | HP15_2427 | 0.34 | -5.2 | |
2,568,559 | - | HP15_2427 | 0.34 | -1.3 | |
2,568,756 | - | HP15_2427 | 0.53 | -4.0 | |
2,569,057 | + | HP15_2427 | 0.82 | -2.0 | |
2,569,077 | + | HP15_2427 | 0.84 | -6.0 | |
2,569,277 | - | +0.6 | |||
2,569,400 | - | +2.6 | |||
2,569,408 | + | -2.8 | |||
2,570,182 | + | HP15_2428 | 0.59 | -5.4 |
Or see this region's nucleotide sequence