Strain Fitness in Marinobacter adhaerens HP15 around HP15_2333

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,452,679	+		HP15_2332	0.47	+0.2
2,452,835	-		HP15_2332	0.59	-0.8
2,452,935	+		HP15_2332	0.66	-0.6
2,452,935	+		HP15_2332	0.66	-0.2
2,452,935	+		HP15_2332	0.66	+0.3
2,452,957	+		HP15_2332	0.68	+0.9
2,453,016	-		HP15_2332	0.72	-1.2
2,453,027	+		HP15_2332	0.73	+0.7
2,453,235	-		HP15_2332	0.88	-0.1
2,453,328	-				+1.4
2,453,331	+				-1.1
2,453,397	+				-0.9
2,453,567	-				+0.1
2,453,667	+				-1.8
2,453,677	+		HP15_2333	0.11	-4.4
2,453,677	+		HP15_2333	0.11	-3.5
2,453,677	+		HP15_2333	0.11	-2.5
2,453,738	-		HP15_2333	0.23	-4.7
2,453,793	+		HP15_2333	0.34	-3.3
2,453,850	+		HP15_2333	0.45	-3.7
2,453,857	-		HP15_2333	0.46	-3.2
2,453,883	+		HP15_2333	0.51	-3.7
2,453,891	-		HP15_2333	0.53	-2.8
2,453,891	-		HP15_2333	0.53	-2.0
2,453,891	-		HP15_2333	0.53	-1.0
2,453,891	-		HP15_2333	0.53	+0.6
2,453,891	-		HP15_2333	0.53	-2.1
2,453,924	-		HP15_2333	0.59	-5.4
2,453,956	-		HP15_2333	0.65	+0.6
2,454,248	+		HP15_2334	0.24	+2.1
2,454,432	-				+0.2
2,454,434	+				+0.4
2,454,435	-				-0.4
2,454,448	+				+1.6
2,454,456	-				-1.2
2,454,575	+		HP15_2335	0.25	-0.4
2,454,591	+		HP15_2335	0.29	-1.0
2,454,594	-		HP15_2335	0.29	+0.0
2,454,596	+		HP15_2335	0.30	+0.2
2,454,606	+		HP15_2335	0.32	+0.6
2,454,609	-		HP15_2335	0.32	-1.0
2,454,613	+		HP15_2335	0.33	+0.5
2,454,614	-		HP15_2335	0.33	+1.7
2,454,883	+		HP15_2335	0.88	-1.4
2,454,886	-		HP15_2335	0.89	-1.4
2,454,888	+		HP15_2335	0.89	+1.2
2,454,888	+		HP15_2335	0.89	+0.1
2,454,895	+				-0.0
2,454,896	-				-0.3
2,454,896	-				-0.1
2,454,963	+				+0.0
2,454,963	+				-0.0
2,454,982	+				-2.0
2,454,987	+				-0.2
2,454,995	-				-0.4
2,455,000	-				+0.1
2,455,000	-				-0.3
2,455,060	-		HP15_2336	0.12	-1.6
2,455,129	+		HP15_2336	0.24	-1.0