Strain Fitness in Marinobacter adhaerens HP15 around HP15_tRNA42
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
2,355,934 | - | HP15_2235 | 0.27 | +0.3 | |
2,355,950 | + | HP15_2235 | 0.29 | -0.7 | |
2,356,073 | + | HP15_2235 | 0.44 | -1.1 | |
2,356,141 | - | HP15_2235 | 0.52 | +0.9 | |
2,356,166 | - | HP15_2235 | 0.54 | +0.2 | |
2,356,166 | - | HP15_2235 | 0.54 | +0.7 | |
2,356,233 | - | HP15_2235 | 0.62 | -0.9 | |
2,356,394 | + | HP15_2235 | 0.81 | +0.1 | |
2,356,733 | + | HP15_tRNA42 | 0.66 | -1.1 | |
2,356,734 | + | HP15_tRNA42 | 0.67 | -2.2 | |
2,356,884 | + | -0.9 | |||
2,356,924 | + | +0.0 | |||
2,356,964 | + | -2.1 |
Or see this region's nucleotide sequence