Strain Fitness in Marinobacter adhaerens HP15 around HP15_1783
Experiment: monoculture; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 2 |
---|---|---|---|---|---|
remove | |||||
1,877,794 | + | HP15_1783 | 0.46 | -0.3 | |
1,877,802 | - | HP15_1783 | 0.50 | -2.0 | |
1,877,833 | - | HP15_1783 | 0.64 | -1.0 | |
1,877,920 | + | -0.1 | |||
1,877,955 | - | +0.6 | |||
1,878,220 | - | -0.9 | |||
1,878,464 | + | HP15_1784 | 0.16 | -0.6 | |
1,878,464 | + | HP15_1784 | 0.16 | +0.3 | |
1,878,472 | - | HP15_1784 | 0.17 | +0.3 | |
1,878,742 | + | HP15_1784 | 0.56 | -0.5 | |
1,878,857 | + | HP15_1784 | 0.72 | +0.4 |
Or see this region's nucleotide sequence