Strain Fitness in Marinobacter adhaerens HP15 around HP15_3505

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,687,871	+		HP15_3502	0.77	+0.0
3,688,011	-				+1.0
3,688,216	+		HP15_3503	0.33	+0.5
3,688,249	+		HP15_3503	0.42	-0.4
3,688,281	-		HP15_3503	0.51	+1.1
3,688,390	-		HP15_3503	0.82	+0.3
3,688,439	+				+0.7
3,688,460	+				+0.5
3,688,473	-				+0.8
3,688,516	+				-0.1
3,688,524	-				+0.1
3,688,535	+		HP15_3504	0.10	-1.0
3,688,636	-		HP15_3504	0.47	-1.9
3,688,667	+		HP15_3504	0.59	-0.3
3,688,720	+		HP15_3504	0.78	-0.4
3,688,757	-				+0.3
3,688,784	+				+0.3
3,688,792	-				-1.1
3,688,798	-				-0.4
3,688,816	-				-0.7
3,689,142	+		HP15_3505	0.33	+0.0
3,689,175	-		HP15_3505	0.37	-0.6
3,689,221	+		HP15_3505	0.41	+0.8
3,689,224	-		HP15_3505	0.42	+0.1
3,689,224	-		HP15_3505	0.42	+0.1
3,689,229	-		HP15_3505	0.42	-1.0
3,689,254	+		HP15_3505	0.45	-0.2
3,689,306	-		HP15_3505	0.50	+0.1
3,689,480	+		HP15_3505	0.68	+0.5
3,689,480	+		HP15_3505	0.68	-0.6
3,689,482	+		HP15_3505	0.68	-0.3
3,689,529	+		HP15_3505	0.73	-0.6
3,689,588	+		HP15_3505	0.79	-1.1
3,689,596	-		HP15_3505	0.80	-0.5
3,689,644	-		HP15_3505	0.85	-0.8
3,689,728	-				-0.0
3,689,752	+				-0.7
3,689,762	-				-0.2
3,689,887	+				-0.3
3,689,915	+				-0.8
3,690,113	+				-6.3
3,690,283	+		HP15_3506	0.16	-6.2
3,690,367	+		HP15_3506	0.23	-5.8
3,690,425	-		HP15_3506	0.27	-5.2
3,690,470	-		HP15_3506	0.30	-5.3
3,690,752	+		HP15_3506	0.52	-4.8