Strain Fitness in Marinobacter adhaerens HP15 around HP15_3496

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,679,677	-		HP15_3494	0.85	+0.7
3,679,707	+				-1.1
3,679,715	-				+0.4
3,679,715	-				+0.9
3,679,752	-				+0.2
3,679,828	-				+0.1
3,679,905	-		HP15_3495	0.12	+0.3
3,679,905	-		HP15_3495	0.12	+0.4
3,679,935	+		HP15_3495	0.17	-0.9
3,679,950	-		HP15_3495	0.19	-0.5
3,680,000	+		HP15_3495	0.26	-0.6
3,680,050	-		HP15_3495	0.33	+0.2
3,680,059	+		HP15_3495	0.35	+0.7
3,680,059	+		HP15_3495	0.35	+0.4
3,680,108	+		HP15_3495	0.42	-3.1
3,680,161	+		HP15_3495	0.49	+0.7
3,680,228	+		HP15_3495	0.59	+0.7
3,680,240	+		HP15_3495	0.61	+0.4
3,680,251	+		HP15_3495	0.62	+0.5
3,680,259	-		HP15_3495	0.64	-0.1
3,680,259	-		HP15_3495	0.64	-0.1
3,680,303	-		HP15_3495	0.70	+0.1
3,680,367	+		HP15_3495	0.79	-0.4
3,680,380	-		HP15_3495	0.81	-0.2
3,680,548	-				+0.1
3,680,548	-				-1.5
3,680,548	-				+0.0
3,680,606	-		HP15_3496	0.13	-1.5
3,680,634	+		HP15_3496	0.20	+0.3
3,680,859	+		HP15_3496	0.75	-0.0
3,680,859	+		HP15_3496	0.75	-0.2
3,680,867	-		HP15_3496	0.77	-1.6
3,680,887	+		HP15_3496	0.82	-2.1
3,681,024	+				-1.2
3,681,035	+				+0.5
3,681,083	-				+3.7
3,681,107	+				-0.5
3,681,145	-		HP15_3497	0.14	+1.0
3,681,305	+		HP15_3497	0.32	-0.3
3,681,313	-		HP15_3497	0.33	+0.2
3,681,407	+		HP15_3497	0.44	+0.5
3,681,415	-		HP15_3497	0.45	+0.5
3,681,556	-		HP15_3497	0.62	-0.5
3,681,568	+		HP15_3497	0.63	-0.1
3,681,654	+		HP15_3497	0.73	-1.3
3,681,678	+		HP15_3497	0.76	-0.3
3,681,713	+		HP15_3497	0.80	+0.5
3,681,721	-		HP15_3497	0.81	+1.2
3,681,730	-		HP15_3497	0.82	-1.6
3,681,738	+		HP15_3497	0.83	-1.1
3,681,770	-		HP15_3497	0.87	+2.1