Strain Fitness in Marinobacter adhaerens HP15 around HP15_3363

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,525,500	+		HP15_3362	0.66	+0.6
3,525,500	+		HP15_3362	0.66	-0.6
3,525,576	-		HP15_3362	0.69	+0.9
3,525,629	+		HP15_3362	0.71	+1.4
3,525,812	-		HP15_3362	0.78	+0.3
3,525,965	+		HP15_3362	0.84	+1.5
3,526,151	-				-0.5
3,526,232	+				-2.0
3,526,270	-				+0.0
3,526,318	-				-3.2
3,526,325	-				+1.0
3,526,330	-				+0.7
3,526,358	+				+0.8
3,526,358	+				+1.1
3,526,374	+				+1.8
3,526,386	+				+0.5
3,526,391	+				+1.3
3,526,391	+				+0.4
3,526,391	+				+0.3
3,526,394	-				+0.0
3,526,399	-				+0.4
3,526,404	-				+0.3
3,526,582	+		HP15_3363	0.11	+0.5
3,526,585	-		HP15_3363	0.11	+0.0
3,526,667	+		HP15_3363	0.16	-0.9
3,526,698	-		HP15_3363	0.18	-0.6
3,526,698	-		HP15_3363	0.18	-1.4
3,526,753	+				+0.4
3,526,802	-		HP15_3363	0.24	+0.3
3,526,880	+		HP15_3363	0.29	-0.2
3,526,939	+		HP15_3363	0.32	+0.8
3,527,025	+		HP15_3363	0.37	-0.2
3,527,219	+		HP15_3363	0.49	-0.3
3,527,252	-		HP15_3363	0.51	+0.5
3,527,266	-		HP15_3363	0.52	-3.1
3,527,398	-		HP15_3363	0.60	-0.3
3,527,457	+		HP15_3363	0.63	-0.3
3,527,478	+		HP15_3363	0.64	-1.0
3,527,523	+		HP15_3363	0.67	-0.6
3,527,527	-		HP15_3363	0.67	+1.0
3,527,629	+		HP15_3363	0.73	-1.1
3,527,631	-		HP15_3363	0.73	+0.7
3,527,647	+		HP15_3363	0.74	-1.3
3,527,678	+		HP15_3363	0.76	-0.4
3,527,763	+		HP15_3363	0.81	-0.7
3,527,793	+		HP15_3363	0.83	-0.1
3,527,929	-				+0.7
3,527,995	-				+0.4
3,528,073	-				-0.4
3,528,333	+				+0.8
3,528,369	-				-0.3
3,528,389	-				+0.3
3,528,468	+				+0.7
3,528,480	+				-0.1
3,528,494	-				-0.5
3,528,508	-				-1.8
3,528,534	+				-1.9
3,528,576	+		HP15_3365	0.12	-0.2
3,528,725	-		HP15_3365	0.18	+0.9
3,528,725	-		HP15_3365	0.18	+0.6
3,528,996	+		HP15_3365	0.29	-0.1
3,529,043	-		HP15_3365	0.31	+0.5
3,529,043	-		HP15_3365	0.31	+0.4