Strain Fitness in Marinobacter adhaerens HP15 around HP15_1888

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
1,991,597	+				-0.1
1,991,640	-				+0.1
1,991,643	+				-2.0
1,991,761	-				+0.9
1,991,761	-				+0.2
1,991,799	+				-0.2
1,991,804	+		HP15_1887	0.10	-0.3
1,991,846	-		HP15_1887	0.15	-0.3
1,991,907	+		HP15_1887	0.23	+0.2
1,991,955	+		HP15_1887	0.29	+0.2
1,991,986	+		HP15_1887	0.33	-1.0
1,991,992	+		HP15_1887	0.33	+0.0
1,992,028	-		HP15_1887	0.38	-0.6
1,992,036	+		HP15_1887	0.39	+0.1
1,992,037	+		HP15_1887	0.39	-0.3
1,992,101	+		HP15_1887	0.47	+0.3
1,992,114	+		HP15_1887	0.49	-0.2
1,992,129	-		HP15_1887	0.51	-0.9
1,992,143	-		HP15_1887	0.52	+0.6
1,992,165	+		HP15_1887	0.55	+0.5
1,992,173	-		HP15_1887	0.56	-0.5
1,992,244	+		HP15_1887	0.65	+0.8
1,992,249	+		HP15_1887	0.66	+2.0
1,992,254	-		HP15_1887	0.66	+1.9
1,992,470	+				-0.0
1,992,498	+				-0.4
1,992,501	-				+0.8
1,992,571	-				+1.1
1,992,626	+		HP15_1888	0.13	+1.0
1,992,649	-		HP15_1888	0.16	-0.1
1,992,710	+		HP15_1888	0.23	+1.1
1,992,710	+		HP15_1888	0.23	+0.2
1,992,716	-		HP15_1888	0.24	-0.3
1,992,717	-		HP15_1888	0.24	-0.4
1,992,761	+		HP15_1888	0.29	-0.6
1,992,805	-		HP15_1888	0.35	-1.2
1,992,864	+		HP15_1888	0.42	-1.4
1,992,897	+		HP15_1888	0.46	-1.2
1,992,905	-		HP15_1888	0.47	+0.2
1,992,943	+		HP15_1888	0.52	-0.0
1,992,981	-		HP15_1888	0.56	-1.5
1,993,054	+		HP15_1888	0.65	+0.4
1,993,139	+		HP15_1888	0.76	+0.4
1,993,173	-		HP15_1888	0.80	-0.4
1,993,191	+		HP15_1888	0.82	-0.8
1,993,418	-				-0.3
1,993,455	+		HP15_1889	0.13	+0.3
1,993,704	+		HP15_1889	0.39	+0.4
1,993,709	+		HP15_1889	0.39	+0.5
1,993,745	-		HP15_1889	0.43	+0.2
1,993,752	+		HP15_1889	0.44	-0.0
1,993,752	+		HP15_1889	0.44	-1.2
1,993,757	+		HP15_1889	0.44	+0.6
1,993,757	+		HP15_1889	0.44	-0.4
1,993,758	-		HP15_1889	0.45	-0.3
1,993,767	+		HP15_1889	0.45	+0.0
1,993,775	-		HP15_1889	0.46	+0.1
1,993,885	-		HP15_1889	0.58	-0.3
1,993,973	+		HP15_1889	0.67	+0.2
1,993,991	-		HP15_1889	0.69	-1.2
1,994,023	+		HP15_1889	0.72	-0.5
1,994,031	-		HP15_1889	0.73	+0.5
1,994,031	-		HP15_1889	0.73	-0.8
1,994,051	+		HP15_1889	0.75	+0.1
1,994,051	+		HP15_1889	0.75	+0.2
1,994,313	+				-0.6
1,994,321	-				-0.4
1,994,321	-				+1.7