Strain Fitness in Marinobacter adhaerens HP15 around HP15_132

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
137,423	+		HP15_131	0.31	+0.2
137,472	-		HP15_131	0.36	+0.4
137,472	-		HP15_131	0.36	+0.2
137,523	-		HP15_131	0.41	-0.4
137,536	+		HP15_131	0.42	+0.0
137,539	-		HP15_131	0.42	+0.0
137,591	+		HP15_131	0.47	-1.4
137,631	+		HP15_131	0.51	-0.3
137,683	+		HP15_131	0.57	-1.1
137,691	-		HP15_131	0.57	-1.5
137,691	-		HP15_131	0.57	+0.2
137,735	-		HP15_131	0.62	-0.4
137,787	-		HP15_131	0.67	+0.3
137,803	+		HP15_131	0.69	-0.1
137,811	-		HP15_131	0.69	-1.0
137,832	-		HP15_131	0.71	-0.0
137,883	-		HP15_131	0.77	+2.0
137,893	-		HP15_131	0.78	-0.8
137,908	-		HP15_131	0.79	+0.1
137,963	+		HP15_131	0.84	-0.0
137,968	+		HP15_131	0.85	-0.3
137,976	+		HP15_131	0.86	-2.5
138,072	-				-2.4
138,096	-				+0.2
138,176	+				+0.2
138,181	+				-1.0
138,199	-				-0.0
138,310	-				-0.6
138,440	-				+1.0
138,457	+				+0.0
138,574	+		HP15_132	0.16	+0.2
138,637	+		HP15_132	0.23	+1.8
138,642	-		HP15_132	0.23	+1.5
138,645	-		HP15_132	0.23	+0.4
138,680	+		HP15_132	0.27	-0.3
138,693	-		HP15_132	0.28	+0.7
138,698	-		HP15_132	0.29	+0.1
138,698	-		HP15_132	0.29	+0.3
138,707	+		HP15_132	0.30	+1.4
138,849	+		HP15_132	0.45	-1.1
138,995	+		HP15_132	0.60	-1.2
139,003	-		HP15_132	0.61	+0.6
139,019	+		HP15_132	0.62	+0.6
139,050	-		HP15_132	0.66	+0.2
139,102	-		HP15_132	0.71	-0.0
139,158	+		HP15_132	0.77	-0.6
139,169	-		HP15_132	0.78	-0.5
139,191	+		HP15_132	0.80	-0.2
139,199	-		HP15_132	0.81	+0.1
139,226	-		HP15_132	0.84	+0.5
139,245	-		HP15_132	0.86	-0.1
139,272	-		HP15_132	0.89	-0.9
139,312	+				+0.1
139,320	-				-0.5
139,352	-				-0.2
139,365	+				+0.4
139,373	-				+0.0
139,373	-				-0.4
139,409	-				-0.2
139,409	-				+0.2
139,414	-				-0.4
139,460	+		HP15_133	0.10	-0.4
139,468	-		HP15_133	0.11	-0.1
139,468	-		HP15_133	0.11	-1.3
139,468	-		HP15_133	0.11	-0.9
139,545	-		HP15_133	0.22	-1.5
139,568	+		HP15_133	0.25	-0.4
139,729	-		HP15_133	0.47	+0.2
139,745	-		HP15_133	0.49	+0.1
139,834	-		HP15_133	0.61	-0.2
139,976	+		HP15_133	0.80	-0.5
139,984	-		HP15_133	0.81	+0.4
139,997	-		HP15_133	0.83	+0.8
140,010	+		HP15_133	0.85	-1.3
140,010	+		HP15_133	0.85	-0.6
140,010	+		HP15_133	0.85	+0.2
140,010	+		HP15_133	0.85	-0.3
140,018	-		HP15_133	0.86	-0.0
140,124	+				+1.2
140,189	-				-0.2
140,203	+				-0.4
140,211	-				-1.0
140,217	+				+0.5
140,236	+				+2.0
140,244	-				+1.0
140,273	+				-0.6
140,345	-				+0.3