Strain Fitness in Marinobacter adhaerens HP15 around HP15_86

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
91,820	-		HP15_84	0.61	-0.3
91,892	+		HP15_84	0.81	+1.7
91,969	-				-0.7
92,159	-		HP15_85	0.20	+0.1
92,272	+		HP15_85	0.36	+1.6
92,319	+		HP15_85	0.43	+1.4
92,360	+		HP15_85	0.49	-2.7
92,368	-		HP15_85	0.50	-0.3
92,368	-		HP15_85	0.50	-1.4
92,520	+		HP15_85	0.72	-1.1
92,520	+		HP15_85	0.72	+0.1
92,540	+		HP15_85	0.75	+1.6
92,547	+		HP15_85	0.76	+1.5
92,591	-		HP15_85	0.82	-0.9
92,613	+		HP15_85	0.85	+1.1
92,619	-		HP15_85	0.86	-1.8
92,661	+				-0.1
92,738	-				-0.6
92,796	-				-3.1
92,820	+				-0.4
92,844	+				-1.5
92,844	+				+1.3
92,852	-				-0.2
92,854	+				+2.5
92,880	-				-0.4
92,919	+		HP15_86	0.15	+0.0
92,976	-		HP15_86	0.23	+2.4
93,009	-		HP15_86	0.28	+0.0
93,011	+		HP15_86	0.28	+1.1
93,011	+		HP15_86	0.28	-0.8
93,011	+		HP15_86	0.28	-0.4
93,019	-		HP15_86	0.29	+1.0
93,037	+		HP15_86	0.32	-1.5
93,037	+		HP15_86	0.32	-0.6
93,037	+		HP15_86	0.32	-0.5
93,038	+		HP15_86	0.32	-0.7
93,045	-		HP15_86	0.33	-1.4
93,053	+		HP15_86	0.34	+1.4
93,061	-		HP15_86	0.36	+0.3
93,186	-		HP15_86	0.54	+1.7
93,288	+		HP15_86	0.69	-1.8
93,308	+		HP15_86	0.72	-2.2
93,315	-		HP15_86	0.73	-3.1
93,359	+		HP15_86	0.79	+2.0
93,640	-		HP15_87	0.34	-1.9
93,640	-		HP15_87	0.34	-0.3
93,703	-		HP15_87	0.48	-0.6
93,720	-		HP15_87	0.52	-0.7
93,798	+		HP15_87	0.70	-1.2
93,811	-		HP15_87	0.73	+1.3
93,813	+		HP15_87	0.73	-0.1
93,995	-				-2.1
94,000	+		HP15_88	0.10	-2.8
94,002	+		HP15_88	0.11	-0.1
94,127	-		HP15_88	0.28	-0.9
94,137	+		HP15_88	0.29	-0.2
94,139	+		HP15_88	0.29	-0.3
94,145	-		HP15_88	0.30	+1.5
94,147	-		HP15_88	0.31	+1.8
94,147	-		HP15_88	0.31	-0.7
94,153	+		HP15_88	0.31	+0.3
94,161	-		HP15_88	0.33	+2.3
94,210	+		HP15_88	0.39	+3.1
94,235	-		HP15_88	0.43	-1.5
94,260	+		HP15_88	0.46	+0.5
94,315	-		HP15_88	0.54	+0.0
94,410	-		HP15_88	0.67	-0.8