Experiment: monoculture; Experiment B, time point 7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_671 and HP15_672 overlap by 8 nucleotides HP15_672 and HP15_673 are separated by 3 nucleotides
HP15_671: HP15_671 - phage portal protein, lambda family, at 690,569 to 692,146
_671
HP15_672: HP15_672 - conserved hypothetical protein, at 692,139 to 692,681
_672
HP15_673: HP15_673 - phage terminase GpA, at 692,685 to 694,646
_673
Position (kb) 692
693 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 691.203 kb on - strand, within HP15_671 at 691.210 kb on + strand, within HP15_671 at 691.226 kb on - strand, within HP15_671 at 691.253 kb on + strand, within HP15_671 at 691.254 kb on - strand, within HP15_671 at 691.358 kb on + strand, within HP15_671 at 691.374 kb on + strand, within HP15_671 at 691.413 kb on - strand, within HP15_671 at 691.624 kb on + strand, within HP15_671 at 691.827 kb on + strand, within HP15_671 at 691.827 kb on + strand, within HP15_671 at 691.827 kb on + strand, within HP15_671 at 691.891 kb on - strand, within HP15_671 at 691.972 kb on + strand, within HP15_671 at 692.019 kb on + strand at 692.019 kb on + strand at 692.027 kb on - strand at 692.027 kb on - strand at 692.092 kb on + strand at 692.150 kb on + strand at 692.157 kb on - strand at 692.204 kb on - strand, within HP15_672 at 692.284 kb on - strand, within HP15_672 at 692.301 kb on + strand, within HP15_672 at 692.309 kb on - strand, within HP15_672 at 692.503 kb on + strand, within HP15_672 at 692.503 kb on + strand, within HP15_672 at 692.506 kb on - strand, within HP15_672 at 692.540 kb on - strand, within HP15_672 at 692.540 kb on - strand, within HP15_672 at 692.595 kb on - strand, within HP15_672 at 692.848 kb on + strand at 692.856 kb on - strand at 692.856 kb on - strand at 692.856 kb on - strand at 692.970 kb on - strand, within HP15_673 at 693.044 kb on + strand, within HP15_673 at 693.052 kb on - strand, within HP15_673 at 693.270 kb on - strand, within HP15_673 at 693.320 kb on - strand, within HP15_673 at 693.399 kb on + strand, within HP15_673 at 693.421 kb on + strand, within HP15_673 at 693.431 kb on + strand, within HP15_673 at 693.441 kb on + strand, within HP15_673 at 693.449 kb on - strand, within HP15_673 at 693.554 kb on + strand, within HP15_673 at 693.554 kb on + strand, within HP15_673 at 693.654 kb on + strand, within HP15_673
Per-strain Table
Position Strand Gene LocusTag Fraction monoculture; Experiment B, time point 7 remove 691,203 - HP15_671 0.40 +1.8 691,210 + HP15_671 0.41 -0.4 691,226 - HP15_671 0.42 +0.2 691,253 + HP15_671 0.43 -1.5 691,254 - HP15_671 0.43 -1.9 691,358 + HP15_671 0.50 +2.4 691,374 + HP15_671 0.51 +2.8 691,413 - HP15_671 0.53 +0.5 691,624 + HP15_671 0.67 +1.4 691,827 + HP15_671 0.80 +1.1 691,827 + HP15_671 0.80 +1.0 691,827 + HP15_671 0.80 -1.3 691,891 - HP15_671 0.84 -0.5 691,972 + HP15_671 0.89 +0.6 692,019 + -1.2 692,019 + -0.4 692,027 - +1.5 692,027 - -0.2 692,092 + -2.5 692,150 + -0.1 692,157 - +0.1 692,204 - HP15_672 0.12 -1.8 692,284 - HP15_672 0.27 -0.5 692,301 + HP15_672 0.30 -0.4 692,309 - HP15_672 0.31 -1.4 692,503 + HP15_672 0.67 +0.1 692,503 + HP15_672 0.67 -0.9 692,506 - HP15_672 0.68 +0.5 692,540 - HP15_672 0.74 +1.1 692,540 - HP15_672 0.74 -0.8 692,595 - HP15_672 0.84 +0.7 692,848 + +1.3 692,856 - +0.2 692,856 - -0.2 692,856 - -0.3 692,970 - HP15_673 0.15 +0.2 693,044 + HP15_673 0.18 +1.1 693,052 - HP15_673 0.19 -1.9 693,270 - HP15_673 0.30 -0.5 693,320 - HP15_673 0.32 -2.6 693,399 + HP15_673 0.36 +0.3 693,421 + HP15_673 0.38 -0.2 693,431 + HP15_673 0.38 -1.2 693,441 + HP15_673 0.39 -1.8 693,449 - HP15_673 0.39 +1.8 693,554 + HP15_673 0.44 +1.0 693,554 + HP15_673 0.44 -0.8 693,654 + HP15_673 0.49 +1.1
Or see this region's nucleotide sequence