Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g91

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
86,308	+				+1.4
86,387	-				-0.2
86,387	-				+0.2
86,387	-				-0.5
86,387	-				+1.4
86,438	-		HP15_p187g90	0.12	-0.7
86,443	-		HP15_p187g90	0.13	-1.9
86,472	+		HP15_p187g90	0.16	-0.8
86,475	-		HP15_p187g90	0.16	+0.9
86,482	+		HP15_p187g90	0.17	+0.9
86,482	+		HP15_p187g90	0.17	-0.5
86,490	-		HP15_p187g90	0.18	+0.1
86,491	+		HP15_p187g90	0.18	-0.3
86,499	-		HP15_p187g90	0.19	+0.4
86,512	+		HP15_p187g90	0.20	-0.3
86,519	-		HP15_p187g90	0.21	-0.1
86,547	+		HP15_p187g90	0.24	+1.4
86,582	+		HP15_p187g90	0.28	-0.9
86,590	-		HP15_p187g90	0.29	-0.0
86,599	-		HP15_p187g90	0.29	+1.5
86,662	+		HP15_p187g90	0.36	-0.3
86,689	+		HP15_p187g90	0.39	-0.0
86,694	+		HP15_p187g90	0.40	-0.6
86,702	-		HP15_p187g90	0.41	-0.3
86,702	-		HP15_p187g90	0.41	+1.2
86,761	+		HP15_p187g90	0.47	-1.3
86,776	-		HP15_p187g90	0.48	+0.0
86,787	+		HP15_p187g90	0.50	-0.3
86,833	+		HP15_p187g90	0.55	-2.2
86,951	+		HP15_p187g90	0.67	+0.2
86,951	+		HP15_p187g90	0.67	-3.5
86,959	-		HP15_p187g90	0.68	+0.6
86,959	-		HP15_p187g90	0.68	-1.2
87,051	+		HP15_p187g90	0.78	-0.6
87,057	-		HP15_p187g90	0.79	+1.2
87,112	+		HP15_p187g90	0.84	-0.5
87,112	+		HP15_p187g90	0.84	-0.8
87,112	+		HP15_p187g90	0.84	+2.2
87,112	+		HP15_p187g90	0.84	-0.0
87,122	+		HP15_p187g90	0.86	-0.5
87,155	+		HP15_p187g90	0.89	+0.8
87,174	-				+0.5
87,229	+				+0.5
87,237	-				+2.1
87,237	-				-1.9
87,269	+				+0.7
87,279	+				-0.0
87,286	+				-0.2
87,286	+				-0.8
87,447	-		HP15_p187g91	0.11	-0.1
87,447	-		HP15_p187g91	0.11	-0.2
87,447	-		HP15_p187g91	0.11	-0.3
87,447	-		HP15_p187g91	0.11	+0.6
87,470	-		HP15_p187g91	0.13	-0.2
87,536	-		HP15_p187g91	0.17	-0.5
87,558	+		HP15_p187g91	0.18	-1.0
87,558	+		HP15_p187g91	0.18	+1.5
87,566	-		HP15_p187g91	0.19	-0.7
87,568	-		HP15_p187g91	0.19	+2.1
87,568	-		HP15_p187g91	0.19	+1.7
87,574	+		HP15_p187g91	0.19	+0.6
87,649	-		HP15_p187g91	0.24	+2.0
87,649	-		HP15_p187g91	0.24	+0.7
87,661	-		HP15_p187g91	0.25	-0.9
87,661	-		HP15_p187g91	0.25	+2.2
87,717	+		HP15_p187g91	0.28	+1.0
87,725	-		HP15_p187g91	0.29	-0.4
87,775	+		HP15_p187g91	0.32	+0.7
87,788	-		HP15_p187g91	0.32	+1.4
87,803	-		HP15_p187g91	0.33	+1.6
87,823	-		HP15_p187g91	0.35	+1.7
87,841	-		HP15_p187g91	0.36	+1.8
87,860	-		HP15_p187g91	0.37	+0.0
87,942	-		HP15_p187g91	0.42	+1.3
87,942	-		HP15_p187g91	0.42	+0.4
87,959	+		HP15_p187g91	0.43	+1.9
88,035	+		HP15_p187g91	0.48	+2.0
88,035	+		HP15_p187g91	0.48	-0.4
88,041	-		HP15_p187g91	0.48	+0.6
88,043	-		HP15_p187g91	0.48	+0.8
88,083	+		HP15_p187g91	0.51	-1.6
88,083	+		HP15_p187g91	0.51	-1.9
88,088	+		HP15_p187g91	0.51	+1.7
88,088	+		HP15_p187g91	0.51	+0.5
88,088	+		HP15_p187g91	0.51	-0.3
88,088	+		HP15_p187g91	0.51	-0.7
88,088	+		HP15_p187g91	0.51	+1.5
88,088	+		HP15_p187g91	0.51	+1.8
88,096	-		HP15_p187g91	0.51	-0.6
88,096	-		HP15_p187g91	0.51	+2.4
88,096	-		HP15_p187g91	0.51	+1.4
88,096	-		HP15_p187g91	0.51	+0.7
88,110	+		HP15_p187g91	0.52	+1.2
88,118	-		HP15_p187g91	0.53	-0.8
88,178	+		HP15_p187g91	0.56	-0.0
88,222	+		HP15_p187g91	0.59	+2.8
88,222	+		HP15_p187g91	0.59	+1.7
88,222	+		HP15_p187g91	0.59	-0.0
88,230	-		HP15_p187g91	0.60	-0.1
88,250	-		HP15_p187g91	0.61	+0.4
88,255	+		HP15_p187g91	0.61	+0.3
88,321	+		HP15_p187g91	0.65	-0.8
88,358	+		HP15_p187g91	0.67	-0.5
88,358	+		HP15_p187g91	0.67	-0.2
88,359	+		HP15_p187g91	0.68	+0.7
88,359	+		HP15_p187g91	0.68	+0.1
88,359	+		HP15_p187g91	0.68	+2.6
88,364	+		HP15_p187g91	0.68	+0.6
88,366	-		HP15_p187g91	0.68	-1.0
88,367	-		HP15_p187g91	0.68	+1.3
88,393	-		HP15_p187g91	0.70	+2.0
88,398	+		HP15_p187g91	0.70	-0.3
88,406	+		HP15_p187g91	0.70	+0.7
88,406	+		HP15_p187g91	0.70	+0.1
88,409	+		HP15_p187g91	0.71	-0.7
88,409	+		HP15_p187g91	0.71	-0.6
88,414	-		HP15_p187g91	0.71	-1.8
88,414	-		HP15_p187g91	0.71	-0.7
88,414	-		HP15_p187g91	0.71	+0.9
88,414	-		HP15_p187g91	0.71	+0.3
88,417	-		HP15_p187g91	0.71	+0.3
88,417	-		HP15_p187g91	0.71	+1.2
88,453	+		HP15_p187g91	0.73	+0.0
88,660	+		HP15_p187g91	0.86	-1.3
88,660	+		HP15_p187g91	0.86	+2.1
88,660	+		HP15_p187g91	0.86	-0.5
88,668	-		HP15_p187g91	0.87	+1.3
88,674	+		HP15_p187g91	0.87	-1.8
88,682	+		HP15_p187g91	0.87	-1.8
88,682	+		HP15_p187g91	0.87	+1.9
88,732	+				+0.1
88,740	-				+1.5
88,740	-				-0.2
88,740	-				-0.5
88,769	+				+1.7
88,777	-				+2.3
88,777	-				+1.7
88,777	-				+0.0
88,787	-				+0.5
88,911	-				-0.5
88,951	+				-0.4
88,951	+				+1.5
88,981	+				+1.7
88,981	+				+0.2
88,989	-				-0.0
88,989	-				-0.4
88,989	-				+1.8
88,994	+				-0.2
89,067	+		HP15_p187g92	0.28	+1.5
89,074	-		HP15_p187g92	0.34	-0.2
89,095	-		HP15_p187g92	0.54	+2.0
89,099	+		HP15_p187g92	0.58	-0.2
89,099	+		HP15_p187g92	0.58	+0.4
89,107	-		HP15_p187g92	0.66	-0.4
89,143	+				+1.7
89,147	+				+0.5
89,203	-				-0.6
89,206	+				-1.0
89,213	+				+1.5
89,219	-				+1.7
89,220	+				-1.3
89,243	-				+0.2
89,256	-				-1.1
89,290	-				+1.8
89,337	+				+1.1
89,383	+		HP15_p187g93	0.13	-1.3
89,393	+		HP15_p187g93	0.16	-0.7
89,401	-		HP15_p187g93	0.17	-2.2
89,401	-		HP15_p187g93	0.17	+2.5
89,414	-		HP15_p187g93	0.20	-0.1
89,422	+		HP15_p187g93	0.22	+1.7
89,451	-		HP15_p187g93	0.29	-0.6
89,482	+		HP15_p187g93	0.36	+2.2
89,501	-		HP15_p187g93	0.40	+1.2
89,505	+		HP15_p187g93	0.41	+1.1
89,554	-		HP15_p187g93	0.52	+0.5
89,554	-		HP15_p187g93	0.52	-1.2
89,603	+		HP15_p187g93	0.63	+0.7
89,669	+		HP15_p187g93	0.79	+0.9
89,676	-		HP15_p187g93	0.80	-0.2
89,698	-		HP15_p187g93	0.85	+2.0
89,782	+				+0.9
89,782	+				+1.0
89,782	+				-0.6
89,785	-				+0.9
89,785	-				-1.2
89,790	-				+0.1
89,790	-				+0.7
89,790	-				+0.6
89,823	+				+1.1
89,823	+				+1.3
89,823	+				-2.2
89,836	-				+1.3