Strain Fitness in Marinobacter adhaerens HP15 around HP15_4048

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
4,280,654	-		HP15_4047	0.32	+2.3
4,280,663	+		HP15_4047	0.32	+0.6
4,280,682	-		HP15_4047	0.34	+1.6
4,280,689	-		HP15_4047	0.34	+1.1
4,280,793	-		HP15_4047	0.42	-0.8
4,280,848	-		HP15_4047	0.46	-1.5
4,280,904	-		HP15_4047	0.50	+1.9
4,280,957	+		HP15_4047	0.54	+2.0
4,280,965	-		HP15_4047	0.54	-1.7
4,280,965	-		HP15_4047	0.54	+0.7
4,281,049	+		HP15_4047	0.60	-0.3
4,281,150	-		HP15_4047	0.67	-0.5
4,281,162	+		HP15_4047	0.68	+0.0
4,281,170	-		HP15_4047	0.69	+1.5
4,281,170	-		HP15_4047	0.69	+1.6
4,281,170	-		HP15_4047	0.69	-0.9
4,281,189	-		HP15_4047	0.70	-1.3
4,281,228	-		HP15_4047	0.73	+1.3
4,281,237	+		HP15_4047	0.74	-0.6
4,281,312	-		HP15_4047	0.79	-1.4
4,281,312	-		HP15_4047	0.79	-1.1
4,281,393	+		HP15_4047	0.85	-1.4
4,281,455	+		HP15_4047	0.90	-0.1
4,281,468	+				-1.4
4,281,476	-				+1.1
4,281,486	-				-2.2
4,281,621	-				-0.4
4,281,677	-				-0.8
4,281,689	+				+0.5
4,281,727	+		HP15_4048	0.11	+0.8
4,281,732	+		HP15_4048	0.12	+0.0
4,281,740	-		HP15_4048	0.13	-1.1
4,282,272	+		HP15_4048	0.83	-0.4
4,282,272	+		HP15_4048	0.83	+0.4
4,282,277	+		HP15_4048	0.83	-1.3
4,282,295	+		HP15_4048	0.86	-1.0
4,282,381	+				+0.6
4,282,382	-				-0.4
4,282,382	-				-0.6
4,282,382	-				-0.5
4,282,382	-				+2.1
4,282,454	-				-1.8
4,282,564	+				+1.1
4,282,576	+		HP15_4049	0.11	-1.7
4,282,709	+		HP15_4049	0.20	-2.6
4,282,712	-		HP15_4049	0.21	-1.1
4,282,760	+		HP15_4049	0.24	-0.3
4,282,979	+		HP15_4049	0.40	+1.1
4,283,006	+		HP15_4049	0.42	-0.5
4,283,165	+		HP15_4049	0.53	+2.1
4,283,275	+		HP15_4049	0.61	+0.2
4,283,283	-		HP15_4049	0.62	+0.4
4,283,307	-		HP15_4049	0.64	+3.0