Strain Fitness in Marinobacter adhaerens HP15 around HP15_3970

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
4,198,977	+		HP15_3969	0.37	+0.8
4,199,004	-		HP15_3969	0.39	+0.0
4,199,132	-		HP15_3969	0.47	-2.1
4,199,153	-		HP15_3969	0.48	-1.8
4,199,246	+		HP15_3969	0.54	-0.2
4,199,246	+		HP15_3969	0.54	+0.5
4,199,274	-		HP15_3969	0.56	+1.1
4,199,393	-		HP15_3969	0.64	+0.8
4,199,400	+		HP15_3969	0.64	-0.4
4,199,410	-		HP15_3969	0.65	+1.4
4,199,454	+		HP15_3969	0.68	+2.8
4,199,462	-		HP15_3969	0.68	-0.3
4,199,478	+		HP15_3969	0.69	-0.4
4,199,478	+		HP15_3969	0.69	-1.1
4,199,486	-		HP15_3969	0.70	+3.0
4,199,486	-		HP15_3969	0.70	+0.2
4,199,488	+		HP15_3969	0.70	+1.7
4,199,488	+		HP15_3969	0.70	+0.5
4,199,499	+		HP15_3969	0.71	+0.5
4,199,499	+		HP15_3969	0.71	+0.8
4,199,554	+		HP15_3969	0.74	-1.3
4,199,554	+		HP15_3969	0.74	+0.1
4,199,554	+		HP15_3969	0.74	-1.6
4,199,562	-		HP15_3969	0.75	-0.6
4,199,562	-		HP15_3969	0.75	+0.5
4,199,562	-		HP15_3969	0.75	-0.4
4,199,652	+		HP15_3969	0.81	-0.7
4,199,732	+		HP15_3969	0.86	-2.0
4,199,760	-		HP15_3969	0.88	-0.6
4,199,799	+				-2.8
4,199,853	+				+1.3
4,199,888	+				-0.9
4,199,888	+				-0.3
4,200,050	-		HP15_3970	0.12	-0.3
4,200,102	-		HP15_3970	0.17	+0.6
4,200,128	+		HP15_3970	0.20	+0.0
4,200,229	-		HP15_3970	0.30	-1.1
4,200,418	+		HP15_3970	0.49	-0.1
4,200,426	-		HP15_3970	0.50	+0.7
4,200,426	-		HP15_3970	0.50	+1.7
4,200,426	-		HP15_3970	0.50	-0.7
4,200,428	+		HP15_3970	0.50	+1.9
4,200,450	-		HP15_3970	0.53	-0.3
4,200,533	+		HP15_3970	0.61	-1.4
4,200,584	-		HP15_3970	0.66	-1.4
4,200,621	-		HP15_3970	0.70	+1.3
4,200,623	+		HP15_3970	0.70	-0.7
4,200,641	+		HP15_3970	0.72	-0.4
4,200,677	-		HP15_3970	0.76	+1.6
4,200,677	-		HP15_3970	0.76	+3.3
4,200,774	-		HP15_3970	0.86	+0.7
4,200,865	+				-0.1
4,200,915	-				+1.2
4,200,917	+				-1.2
4,201,221	+		HP15_3971	0.82	+1.3
4,201,272	-				-1.1
4,201,402	+				+1.0
4,201,526	+				-0.3
4,201,531	+				-0.3
4,201,534	-				-0.6
4,201,534	-				-0.4
4,201,549	-				+1.3
4,201,629	+				+0.4
4,201,634	+				+1.3
4,201,637	-				-0.9
4,201,757	+		HP15_3972	0.24	+0.6
4,201,765	-		HP15_3972	0.25	+0.0
4,201,787	+		HP15_3972	0.29	-0.5