Strain Fitness in Marinobacter adhaerens HP15 around HP15_3541

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
3,727,415	+		HP15_3540	0.38	-2.2
3,727,423	-		HP15_3540	0.39	+0.7
3,727,458	+		HP15_3540	0.43	+0.9
3,727,459	+		HP15_3540	0.43	+0.3
3,727,464	+		HP15_3540	0.43	-0.4
3,727,469	+		HP15_3540	0.44	-2.2
3,727,494	-		HP15_3540	0.47	-0.7
3,727,539	-		HP15_3540	0.52	-2.0
3,727,548	-		HP15_3540	0.52	-0.1
3,727,557	+		HP15_3540	0.53	+1.9
3,727,565	-		HP15_3540	0.54	+1.7
3,727,690	+		HP15_3540	0.68	-0.0
3,727,803	-		HP15_3540	0.80	+1.1
3,727,803	-		HP15_3540	0.80	+2.4
3,727,907	+				+0.1
3,727,907	+				-1.0
3,727,907	+				-2.5
3,727,907	+				-2.9
3,727,921	-				-0.9
3,727,947	+				-1.3
3,727,996	+				-0.8
3,728,000	+				+0.5
3,728,055	+				+1.4
3,728,192	-				+0.0
3,728,338	+				-0.7
3,728,363	+				-0.1
3,728,363	+				-1.2
3,728,363	+				+0.0
3,728,364	-				-0.8
3,728,364	-				-1.1
3,728,364	-				+1.5
3,728,365	-				-0.8
3,728,422	+				-0.6
3,728,502	+				+1.3
3,728,579	-		HP15_3541	0.16	+0.1
3,728,626	+		HP15_3541	0.20	+0.6
3,728,838	+		HP15_3541	0.38	+0.4
3,728,870	-		HP15_3541	0.41	-0.9
3,728,894	-		HP15_3541	0.43	-1.8
3,728,894	-		HP15_3541	0.43	+2.3
3,728,894	-		HP15_3541	0.43	+2.1
3,728,894	-		HP15_3541	0.43	+0.0
3,729,059	-		HP15_3541	0.56	-0.2
3,729,080	+		HP15_3541	0.58	-1.2
3,729,088	-		HP15_3541	0.59	+2.1
3,729,141	+		HP15_3541	0.63	-0.2
3,729,162	+		HP15_3541	0.65	-0.5
3,729,162	+		HP15_3541	0.65	+1.3
3,729,254	-		HP15_3541	0.73	-0.1
3,729,265	+		HP15_3541	0.74	+1.3
3,729,273	+		HP15_3541	0.75	+0.0
3,729,304	+		HP15_3541	0.77	-0.4
3,729,304	+		HP15_3541	0.77	+1.9
3,729,335	+		HP15_3541	0.80	-0.2
3,729,401	+		HP15_3541	0.85	-0.3
3,729,424	+		HP15_3541	0.87	-0.1
3,729,424	+		HP15_3541	0.87	+0.4
3,729,424	+		HP15_3541	0.87	+0.5
3,729,474	-				+1.4
3,729,508	-				+0.9
3,729,616	+				+1.6
3,729,680	+		HP15_3542	0.12	+4.6
3,729,688	-		HP15_3542	0.13	-1.0
3,729,765	-		HP15_3542	0.22	+0.3
3,729,800	+		HP15_3542	0.26	-0.4
3,729,808	-		HP15_3542	0.27	-0.2
3,729,808	-		HP15_3542	0.27	-0.5
3,729,875	+		HP15_3542	0.34	-0.8
3,729,916	-		HP15_3542	0.39	+1.1
3,729,929	+		HP15_3542	0.41	+0.6
3,729,929	+		HP15_3542	0.41	-1.0
3,729,937	-		HP15_3542	0.42	-0.1
3,729,995	-		HP15_3542	0.48	-0.9
3,730,058	+		HP15_3542	0.56	-0.6
3,730,066	-		HP15_3542	0.57	-0.5
3,730,077	-		HP15_3542	0.58	+0.4
3,730,094	+		HP15_3542	0.60	+0.7
3,730,102	-		HP15_3542	0.61	+1.7
3,730,123	-		HP15_3542	0.63	-0.3
3,730,126	-		HP15_3542	0.63	-1.3
3,730,128	+		HP15_3542	0.64	+0.9
3,730,135	+		HP15_3542	0.64	+1.3
3,730,193	+		HP15_3542	0.71	+0.0
3,730,193	+		HP15_3542	0.71	+1.8
3,730,193	+		HP15_3542	0.71	+0.0
3,730,200	+		HP15_3542	0.72	+0.6
3,730,201	-		HP15_3542	0.72	-1.7
3,730,208	-		HP15_3542	0.73	-1.5
3,730,318	-		HP15_3542	0.86	-0.4
3,730,380	-				-0.4
3,730,382	+				+0.1
3,730,409	+				-0.5
3,730,417	-				-1.7
3,730,566	-				-1.0