Strain Fitness in Marinobacter adhaerens HP15 around HP15_3502

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
3,686,179	-		HP15_3501	0.54	-2.4
3,686,291	-		HP15_3501	0.60	+1.4
3,686,291	-		HP15_3501	0.60	-2.4
3,686,301	-		HP15_3501	0.60	-1.1
3,686,328	+		HP15_3501	0.62	-0.6
3,686,336	-		HP15_3501	0.62	+1.6
3,686,374	+		HP15_3501	0.64	-1.7
3,686,382	-		HP15_3501	0.64	+0.5
3,686,382	-		HP15_3501	0.64	-0.2
3,686,382	-		HP15_3501	0.64	-0.3
3,686,419	+		HP15_3501	0.66	-0.9
3,686,546	-		HP15_3501	0.72	-2.7
3,686,549	+		HP15_3501	0.72	+1.7
3,686,549	+		HP15_3501	0.72	+0.1
3,686,557	-		HP15_3501	0.73	+1.3
3,686,557	-		HP15_3501	0.73	-2.4
3,686,559	+		HP15_3501	0.73	+2.1
3,686,567	-		HP15_3501	0.73	+1.0
3,686,678	+		HP15_3501	0.78	-0.5
3,686,691	-		HP15_3501	0.79	+1.2
3,686,691	-		HP15_3501	0.79	+1.8
3,686,869	+		HP15_3501	0.88	-1.6
3,686,979	+				+0.3
3,686,979	+				+0.4
3,686,987	-				+0.2
3,686,987	-				+3.8
3,687,036	+				-1.9
3,687,065	+				-0.3
3,687,108	-				+0.6
3,687,160	+				-0.3
3,687,165	+				+0.1
3,687,182	+				-0.3
3,687,383	+		HP15_3502	0.25	-0.3
3,687,391	-		HP15_3502	0.26	+1.9
3,687,396	-		HP15_3502	0.26	-1.6
3,687,398	+		HP15_3502	0.26	-1.6
3,687,445	-		HP15_3502	0.31	+1.1
3,687,485	+		HP15_3502	0.36	-1.5
3,687,491	+		HP15_3502	0.36	+1.4
3,687,579	-		HP15_3502	0.46	-1.8
3,687,580	-		HP15_3502	0.46	-1.0
3,687,628	-		HP15_3502	0.51	-3.8
3,687,731	+		HP15_3502	0.62	-1.6
3,687,744	-		HP15_3502	0.63	+0.3
3,687,771	-		HP15_3502	0.66	+1.5
3,687,871	+		HP15_3502	0.77	+0.2
3,688,011	-				+2.8
3,688,216	+		HP15_3503	0.33	-1.1
3,688,249	+		HP15_3503	0.42	-0.8
3,688,281	-		HP15_3503	0.51	-1.1
3,688,390	-		HP15_3503	0.82	-2.2
3,688,439	+				-0.7
3,688,460	+				-0.4
3,688,473	-				+0.0
3,688,516	+				-0.2
3,688,524	-				-0.2
3,688,535	+		HP15_3504	0.10	-1.0
3,688,636	-		HP15_3504	0.47	-1.5
3,688,667	+		HP15_3504	0.59	-1.1
3,688,720	+		HP15_3504	0.78	-1.1
3,688,757	-				+0.4
3,688,784	+				+0.9
3,688,792	-				-0.3
3,688,798	-				-0.7
3,688,816	-				+0.4