Strain Fitness in Marinobacter adhaerens HP15 around HP15_3440

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
3,618,364	+		HP15_3439	0.47	-1.1
3,618,364	+		HP15_3439	0.47	-0.6
3,618,364	+		HP15_3439	0.47	-1.3
3,618,364	+		HP15_3439	0.47	+0.6
3,618,372	-		HP15_3439	0.47	+1.3
3,618,372	-		HP15_3439	0.47	-0.9
3,618,372	-		HP15_3439	0.47	+0.3
3,618,372	-		HP15_3439	0.47	+0.2
3,618,372	-		HP15_3439	0.47	-0.8
3,618,372	-		HP15_3439	0.47	-0.6
3,618,372	-		HP15_3439	0.47	-0.5
3,618,372	-		HP15_3439	0.47	-0.9
3,618,613	+		HP15_3439	0.64	-1.1
3,618,707	+		HP15_3439	0.70	+0.1
3,618,715	-		HP15_3439	0.71	+0.6
3,618,829	+		HP15_3439	0.79	+0.9
3,618,965	+		HP15_3439	0.88	-0.2
3,618,973	-		HP15_3439	0.88	-0.1
3,619,070	-				+2.3
3,619,117	-				-0.1
3,619,145	+				-1.2
3,619,161	+				-0.5
3,619,209	+				-0.1
3,619,239	+				+1.6
3,619,239	+				-3.3
3,619,239	+				-0.6
3,619,247	-				-0.8
3,619,247	-				-1.2
3,619,249	+				-0.6
3,619,249	+				+1.9
3,619,257	-				-0.2
3,619,361	-				+1.8
3,619,423	+		HP15_3440	0.11	-0.3
3,619,431	-		HP15_3440	0.12	+1.2
3,619,471	+		HP15_3440	0.14	-0.8
3,619,530	-		HP15_3440	0.18	+0.7
3,619,537	+		HP15_3440	0.19	+1.0
3,619,566	-		HP15_3440	0.21	-0.1
3,619,710	+		HP15_3440	0.31	-1.3
3,619,731	+		HP15_3440	0.32	-0.1
3,619,765	-		HP15_3440	0.35	+1.1
3,619,919	+		HP15_3440	0.45	+0.3
3,620,056	-		HP15_3440	0.55	+0.9
3,620,056	-		HP15_3440	0.55	-1.0
3,620,104	-		HP15_3440	0.58	+1.1
3,620,104	-		HP15_3440	0.58	+0.6
3,620,141	+		HP15_3440	0.61	+0.5
3,620,141	+		HP15_3440	0.61	+5.7
3,620,191	-		HP15_3440	0.64	-0.0
3,620,193	+		HP15_3440	0.64	-0.6
3,620,239	+		HP15_3440	0.67	+0.5
3,620,334	-		HP15_3440	0.74	-0.5
3,620,472	-		HP15_3440	0.84	+0.3
3,620,491	-		HP15_3440	0.85	-1.2
3,620,503	+		HP15_3440	0.86	-3.1
3,620,570	-				-1.3
3,620,572	+				-0.6
3,620,572	+				+1.8
3,620,653	+				-0.2
3,620,653	+				+0.0
3,620,655	-				+1.0
3,620,655	-				+0.0
3,620,655	-				+1.6
3,620,665	-				-0.4
3,620,795	-				-0.2
3,620,927	+				+0.5
3,620,976	+				+0.4
3,621,063	-				-0.7
3,621,389	+		HP15_3441	0.81	-0.8
3,621,395	+		HP15_3441	0.82	+0.0
3,621,510	+				+0.5
3,621,627	-		HP15_3442	0.19	-1.5
3,621,682	+		HP15_3442	0.33	-1.0